Pectobacterium polonicum: LW347_16890
Help
Entry
LW347_16890 CDS
T08488
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ppoo
Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoo03009
]
LW347_16890
03016 Transfer RNA biogenesis [BR:
ppoo03016
]
LW347_16890
Ribosome biogenesis [BR:
ppoo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LW347_16890
Transfer RNA biogenesis [BR:
ppoo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LW347_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
DUF6764
Motif
Other DBs
NCBI-ProteinID:
UVO07524
UniProt:
A0AAE9T1X6
LinkDB
All DBs
Position
complement(3729387..3730538)
Genome browser
AA seq
383 aa
AA seq
DB search
MSDSFNSKSGKVRVMYVRSDDEGEKENKNKRPADKDRRGDRRDGGGSRDQREKPKHPRDV
NPRYARENPSRDGDSSAKSPWGNKDRNERSGDKPRRPRGDDTGGYESPWKTVPRAPSESD
TPDHGGITGKSQIDPEQLRRQRQEETRVYGENACQALFKNRSEVIVRAWFLQEVTPRFRD
ALRWMAANRKAYHVVEEEELIKASGTEHHGGVCFLIKKRQGMDVREYLKTVGESDCVLAL
EDVGNPHNLGGIMRSCAHFGVKGVLVQDAALLESGAAVRTAEGGAEHVKAINADDFLSVL
AEFRHAGYTIVTTSSHKGTALSKATLPAKTVIVLGQEGDGLSDSAWQQGDVKVSIGGTGK
VESLNISVATGILLSEWWRQNQA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcattcaatagtaaaagcggcaaagtccgtgtgatgtacgtccgcagtgat
gatgagggcgagaaagagaataaaaacaagcgccctgctgacaaagatcgtcgtggcgat
cggcgtgatggtggtggctctcgcgatcagcgtgaaaagccgaagcacccgcgtgatgtt
aacccgcgctatgcccgggaaaatccgtcccgtgacggcgatagcagtgcgaaatcgccg
tggggcaataaagatcgtaacgaacgcagcggtgataagcctcgccggccgcgcggtgac
gataccggtggctatgaatcaccgtggaaaaccgtgcctcgtgcgccaagcgagagcgat
acgccggatcacggcggtattactggcaagagccagatcgatcctgagcaactgcgtcgc
cagcgtcaggaagaaacgcgagtctacggtgaaaatgcctgtcaggcgctgtttaaaaac
cgttctgaagtgatcgttcgtgcctggttcctgcaagaagtgacgccgcgtttccgcgat
gcactgcgctggatggcggcaaaccgcaaggcttatcacgtcgtggaagaggaagagcta
attaaggcttccggcaccgaacaccatggcggcgtctgtttcctgattaaaaagcgtcag
ggtatggatgtgcgtgagtatctgaaaacggttggcgagagtgactgtgtgctggcgctg
gaagatgtgggtaacccgcacaacctcggcggtattatgcgtagctgcgcgcatttcggc
gtgaaaggcgtgctggttcaggatgcagcgctgctggaatccggtgcggcggtacgcacg
gcagaaggcggtgcggaacacgttaaagcgatcaacgctgacgatttcctgtctgtactc
gctgaattccgtcacgcaggctacaccatcgtgaccacctcgagccataaagggacggcg
ctgtcgaaagcgacgcttccggcgaaaaccgtgattgtgctgggtcaggaaggtgatggt
ctgtcggatagcgcctggcaacaaggggacgtgaaagtctctatcggcggtacgggtaag
gttgaaagcctgaacatttcagtcgcaacgggcattttgctgtccgagtggtggcggcag
aaccaagcctga
DBGET
integrated database retrieval system