Pectobacterium polonicum: LW347_17420
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Entry
LW347_17420 CDS
T08488
Name
(GenBank) RNA ligase RtcB family protein
KO
K18148
release factor H-coupled RctB family protein
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LW347_17420
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Mst1_SARAH
DUF1409
Motif
Other DBs
NCBI-ProteinID:
UVO07611
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All DBs
Position
3856661..3857782
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AA seq
373 aa
AA seq
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MGNAIRSISARVSVIATENTWIEDKAIQQLQITSQLPDMVRVAGMPDLHPGRGYPIGAAF
FSQQRFYPALVGNDIGCGMALWRTSLNANKISLDKLEKRLGNIDGPLEDEIEIPPSLADF
RYSLGTIGGGNHFAELQQLDEIYQPETLHALHIDPKQLLLLVHSGSRGLGQTILEAHVRE
FGHQGLEANTPAAAAYLEQHQFALTFATHNRRLIAQRMLDRWHTEGTAALDVNHNLVTST
TIEGISGWLHRKGATPADCGPVIIPGSRGDYSYIVQPIPHADSLYSLAHGAGRKWMRTEC
KDRLSSRYSVQQLARTRFGSRVICQDRQLIFQEAPEAYKPIDSVIGAMQQAGLITLIARL
KPVLTYKTRGEDK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctattcgctctatttcggcgcgcgtcagtgtgatcgcgacggaaaatacc
tggattgaagataaagcaatccaacagcttcaaattacctcacagcttcccgatatggta
cgcgtggccggtatgccagatttgcatccgggccgtggctatcccattggggcggcgttt
ttttcacaacagcgcttctaccccgctctggtcggaaatgatatcggctgcggcatggcg
ctatggcgcactagcctgaacgctaacaaaatttcgctggataagttggaaaaacggctt
ggcaatatcgatgggccactggaagacgagatcgaaattcccccatcgctggcggatttc
cgctattcccttggcaccatcggcggcggtaaccactttgcagaattgcagcagcttgat
gaaatttatcagccagagacgctgcatgctctgcacatcgatcctaagcagctactgctg
ctcgtgcatagcggctcacgcggattagggcaaaccatactggaagcccacgtgcgagaa
ttcggccatcaagggcttgaagccaacacgccagccgctgcggcctatttggaacagcat
cagttcgcgttgacatttgccacccacaatcggcggctgatcgcacagcgcatgctggat
cgctggcatacggaaggcactgccgcactggacgtgaaccacaatctggtgacatcgacg
acgattgagggcatttccggctggctgcaccgcaaaggcgcgacgcccgccgactgcggc
ccggttatcattcccggatcgcgcggcgactacagctatatcgtgcagcctatacctcac
gccgacagcctgtattcgttggcacatggcgcaggcagaaagtggatgcgcacggagtgt
aaggatcgactgtcttcacggtatagcgtccagcaactggcgcgtactcgtttcggcagc
cgtgtgatttgtcaggataggcagctgatttttcaggaagcaccagaagcctacaaaccg
atagacagtgtgatcggcgcgatgcagcaggcaggattaattacgttaattgctcgcctg
aaacccgtactcacctacaaaacgcgcggggaggataaatga
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