Pectobacterium polonicum: LW347_18250
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Entry
LW347_18250 CDS
T08488
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00470
D-Amino acid metabolism
ppoo00550
Peptidoglycan biosynthesis
ppoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LW347_18250 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LW347_18250 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppoo01011
]
LW347_18250 (murD)
Enzymes [BR:
ppoo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LW347_18250 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppoo01011
]
Precursor biosynthesis
Amino acid ligase
LW347_18250 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UVO07764
UniProt:
A0AAE9T237
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All DBs
Position
complement(4034165..4035481)
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AA seq
438 aa
AA seq
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MVDYQGKKVVIIGLGLTGLSCVDFFLARGVVPRVVDTRISPPGLDKLPELVERHLGSLNE
DWLMNADLIVASPGVALATPILCDAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMARAAGWQVGVGGNIGLPALQLLEQPAQLYVLELSSFQLETTSSLHAAAATILNV
TEDHTNRYPFGLQQYRAAKLRIYEHADLCVVNADDALTMPIRGADVRCRSFGVDVGDYHL
NRQQGETWLRVNGERVLNTREIKLVGQHNYTNALAALALADAVKIPRASALAALTSFTGL
PHRFQMAFERNGVRWINDSKATNVGSTEAALSGLAVEGTLHLLLGGDGKSADFSPLVPYL
QGERIRLYCFGRDGEQLAALRPEIAEQTETMEQAMRIIAERIKPGDMVLLSPACASLDQF
RSFEQRGDEFARLAKELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggactatcagggtaaaaaagtcgtcattatcgggttgggtctgaccgggctctcc
tgtgttgatttctttctcgcgcgtggtgtcgtaccgcgcgtggtggatacccgcatcagt
ccaccaggtctggataagctgccagaactggtggaacggcatcttggtagcctgaatgaa
gactggctgatgaatgcggatttgatcgtcgccagccccggagtggcgttggcgacgccg
attctgtgtgacgccgctgatgctggtattgagatcgttggcgatatcgaactgttctgc
cgtgaagcgcaggctccgattgtggcgattaccggttcgaacggcaaaagtacggtgacg
acgctggtcggtgaaatggcgcgcgcggcaggttggcaggtgggcgttggtggcaacatt
ggtttacctgcgctgcaactgctggaacagccagctcagttgtatgtactggaactgtcg
agcttccaactggaaacgacgagtagtctgcatgctgcagcggcaaccattctgaacgta
acggaagatcacaccaaccgttacccgtttggtctacagcagtatcgtgcagcgaaattg
cgtatctatgaacatgcagatctgtgcgtggtgaatgcagacgatgcgttaaccatgccg
attcgtggtgccgatgtgcgctgccgcagttttggtgttgatgtcggtgattatcatctc
aaccgacagcagggtgaaacctggctgcgtgtaaacggtgaacgtgtgctcaacactcgt
gaaatcaagcttgtcggacagcacaactatacgaacgcattggcagcgctggcactggct
gatgccgtgaagattccacgggcttctgcactggcggcattgacgtcatttaccgggcta
ccgcatcgcttccaaatggcctttgagcgcaatggtgtgcggtggatcaatgattctaaa
gccaccaatgtcggtagcaccgaagcggcattaagcggtttggctgtcgaaggaacgttg
catctgttgttgggcggcgacggaaagtctgccgacttctcgccgctggtgccgtattta
cagggtgagcgtattcgtttgtattgctttggccgtgatggtgaacaactggccgcgctg
cgcccggagattgctgaacagacagaaacaatggaacaggcgatgcgcattatcgctgaa
cgtattaagccgggtgacatggtgttgctatcgccagcttgtgcaagcctggatcaattt
cgcagttttgaacagcgaggtgatgaatttgctcgcctggcgaaggaattaggttga
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