Pectobacterium polonicum: LW347_19640
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Entry
LW347_19640 CDS
T08488
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00040
Pentose and glucuronate interconversions
ppoo01100
Metabolic pathways
ppoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LW347_19640
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LW347_19640
Enzymes [BR:
ppoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LW347_19640
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UVO08022
UniProt:
A0AAE9NQY6
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Position
4335120..4336244
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AA seq
374 aa
AA seq
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MKYLLPTAATGLLLLAAQPAMAANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAQVD
SKGKKVKGGAYPLIITYNGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITIQGTNGS
SANFGVWIVNSSNVVVRNMRFGYMPGGAQDGDAIRIDNSPNVWIDHNEIFAKNFECKGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGASNSDTGRNLTYHHNIYRDVNSRL
PLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENALNPVTARNDSSNFGTWELR
NNNITKPADFSKYNITWGRPSTPHVNADDWKSTGKFPSISYKYTPVSAQCVKDKLANYAG
VGKNLAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctattgcctacggcagccactggattgttattactcgctgctcagccagcg
atggccgccaatacgggcggctatgccaccacagatggtggagatgtttccggcgccgta
aaaaaaactgcacgttctctgcaagagattgtagatattattgaagccgcgcaagtggat
tcaaaaggcaagaaagttaaaggcggagcttacccgctcattatcacttataacggtaat
gaagattcattaatcaaagcggctgaaaagaatatttgcggccagtggagtaaggacgcc
cgcggcgtacaaatcaaagagttcaccaaaggcattactatccagggcaccaatggctca
tccgccaacttcggtgtttggatcgtgaactcttctaacgtcgtggtacgtaatatgcgc
tttggctatatgccaggcggcgcgcaagacggcgacgccattcgtattgataactcgcca
aacgtctggattgaccataatgagatctttgccaaaaactttgagtgtaaaggcacgcca
gataatgacaccacttttgaatcggccgtcgatatcaaaaaagggtcaactaacgtcacc
gtgtcatacaactatatccatggtattaaaaaagtgggtctgagcggtgcaagcaattcg
gatacgggtcgtaacctgacttaccatcacaatatctatcgcgatgttaattcacgtctg
ccgctacagcgcggtggtctggttcatgcctacaacaacctgtatgacggcatcactggc
tctggctttaacgttcgccagaaagggattgcgctgatcgaaagtaactggttcgaaaat
gcactgaatccggtgacggcacgtaacgacagctccaacttcggtacttgggagttgcgt
aacaacaacatcaccaaaccagcagacttttccaaatacaacatcacctggggtcgccct
tccacgcctcacgtcaatgccgatgattggaaaagtaccgggaaattcccttccatttct
tacaaatacacgcctgtttcagcgcagtgtgtgaaggataaactggcaaactatgctggc
gtagggaaaaacctggcagtactgacagcagctaactgtaaataa
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