Pectobacterium polonicum: LW347_19685
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Entry
LW347_19685 CDS
T08488
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LW347_19685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_19685
Transporters [BR:
ppoo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LW347_19685
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UVO10584
UniProt:
A0AAE9T4K0
LinkDB
All DBs
Position
complement(4345375..4346985)
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AA seq
536 aa
AA seq
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MKARAILRTLLLGSLCMAATPAILSAKTPDDQLIVGMNMNNMLSLDPAAMTGNEVVGIIV
NLYDSLVVLDPANLSHILPSLAKSWSVNDAGNVITFNLVDNAKFHSGNPVTAQDFAWSMK
RLLSLNMAQATTWKSYGFTAENVEKMIRAKDDHTVEIELPKPNDPKLVIYSLATLGSGSV
LDSKTVMKHEKNGDWGNGWLTTNEAGSGPFKLDVWQAKDVLRISKVENNWQGDAKMRRVI
FRHMTESQALRLMIEKGDIDVASGMSVPDINALKQDKDVVVDEVKKGTLYYVAMSLKNEY
FAKPKVREAVRYLIDYDGVNKTVMPGYGFYHQRPIQKGMDATLPDPGYKLDVPRAQALLA
EAGYPNGFETTLRVLSDQPFLNLATSVQSTLAQAGIKAKIISGTGNQVYGAMRDRNFDML
VGRGGGGVDPHPHSSLRSVVYNPDNSDEAKLTNFQGWRTSFYDKPLNDMIDQALLEKDPQ
KQKQMYINVQNRYEELFPAIIPVSQMIDSVVLRKDVKGYVPHPSSTTHLREVYKQR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacgagcaatactccgtaccctgctgttaggttcactctgcatggccgcgacg
ccggccattctatcggcaaaaacccctgacgatcagctgatcgtggggatgaacatgaac
aacatgctctcactcgatccggccgccatgaccggtaacgaagtggtgggcatcatcgtt
aacctctatgactcgctggtggtgctcgatcctgccaatctgagtcatatcctgccttct
ctggcgaaaagctggagcgtcaatgatgcgggcaatgtcattaccttcaatctggtcgat
aacgccaaattccattccggtaaccccgtgacggcacaagatttcgcttggtcgatgaaa
cgtctgcttagcctcaacatggctcaggccacgacgtggaaatcctacggcttcaccgcg
gaaaacgtggagaaaatgatccgtgccaaagacgatcacactgttgaaattgagttgccg
aagccaaacgaccccaagctggtgatctattcgctggcaacgttaggtagtggctcggtg
ctggacagtaaaacggtcatgaagcacgagaaaaacggtgactggggtaacggctggcta
accacgaacgaagccggttctggcccgttcaagctggatgtgtggcaggcgaaagatgtg
ctgcgcatcagtaaggttgagaacaactggcagggcgacgcgaaaatgcgccgcgtgatt
ttccgccacatgactgaatcacaggcgctgcgtctgatgattgaaaaaggcgacattgac
gtggcctctggcatgtcggtgccggatatcaatgcgttaaaacaagataaagacgttgtg
gttgatgaggtgaaaaaaggcacgctgtactacgttgctatgagcctgaaaaacgaatat
ttcgcgaaaccgaaagtgcgcgaagcggttcgctacctgattgattacgatggcgtcaat
aagacggtaatgcctggctacggtttctatcatcagcgtcccatccaaaaagggatggat
gcgacgttgccggaccctggctataagctggacgtgccacgcgctcaggcgctgctggcc
gaagcgggctacccgaatggatttgaaaccacgctacgtgttctttccgatcagccgttc
ctgaatctggcgacgtcggtacagtccacgctggcacaggcgggcatcaaagccaaaatc
atctccggcaccggtaatcaggtttacggcgcgatgcgcgatcgtaacttcgatatgctg
gtcggccgcggcggtggtggcgtcgatccgcatcctcactccagcctgcgttctgttgtc
tataacccggataacagcgacgaagccaaactgaccaacttccaaggctggcgcacctct
ttctacgacaaacctctgaatgacatgatcgatcaggcgctgttggagaaagatcctcag
aaacagaagcagatgtatatcaacgtacagaatcgctatgaagaactgttcccggccatt
attccggtgtcgcagatgatcgattctgtggtgttgcgtaaggacgtgaaaggctatgtg
ccgcatccgtcttctacgacacatctgcgtgaggtgtataagcagcgctag
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integrated database retrieval system
