Pectobacterium polonicum: LW347_19960
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Entry
LW347_19960 CDS
T08488
Symbol
acrD
Name
(GenBank) multidrug efflux RND transporter permease AcrD
KO
K18324
multidrug efflux pump
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LW347_19960 (acrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_19960 (acrD)
Transporters [BR:
ppoo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LW347_19960 (acrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
UVO08082
UniProt:
A0AAE9NR25
LinkDB
All DBs
Position
complement(4408156..4411272)
Genome browser
AA seq
1038 aa
AA seq
DB search
MANFFVDRPIFAWVLAILLSLCGMLAIKSLPLEQYPDLAPPSVRITANYPGASAQTLENT
VTQVIEQSMTGLDNLMYMSSDSSNTGQSRIMLTFEAGTDPDEARQQVQNQLQSATRKLPQ
DVQQQGVTVSKTGDTNILMVAFVSTDGSMDKQDIADYVATNIQEPISRISGVGEVDSYGS
QYAMRIGLDPAKLMDYALTTSDVVRAIESQNSQVSVGQVGGVPSVDNQALNATINAQSLL
QTPQQFRDITLRVNQDGSAVTLANVAEVELGSERYDFLSRFNGQAASGLGVKLASGANEL
ETDKRVRERIEELSQYFPHGLEAKIAFETSPFVKASITDVVKTLFEAVLLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAVLYAFGFSLNTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLSPRDATRKSMGQVQGALVGIALVLSAVFVPMAFFGGTTGAIYRQFSITIVTSMIL
SVLVAMILTPALCATLLKPLAKGQHHGRKGFFGWFNRSFTRTSLKYERGVGKILVSSGRW
LLLYMGIIGIMAFLFFRLPTSFLPQEDRGVFTTQVQLPPGSTQQQTLQVVNKIEQYYLTQ
EKDTVTSVFSTIGSGPGGNGQNVARLFVRLKDWDERTTPESSSFAVIERATKAFRDIKEA
RVFASSPPSINGLGSAAGFAMRLQDRGGLGHDALMEARDRLLNMADSNRELTRVRHNGLD
DSSQLRIHIDQRKAQALGVSVDDINSTLKTGWGSTYVNDFLDRGRVKKVYVQAAAKFRML
PDDISKWYVRNNSGGMVPFSAFAQTVWETGSPRLERYNGYSSLEIVGEAMPGVSTGTAMT
IMESLVAKLPEGFGLEWTGMSLQERLSGAQAPALYAVSLLVVFLCMAALYESWTVPFSVM
LVVPMGVLGALVATWARGLENDVYFQVGLLTVVGLSAKNAILIVEFANEMNQKGKDLVES
TLEASRQRLRPILMTSLAFIFGVLPMATSSGAGSASQHAVGTGVIGGMLAATFLAIFFVP
LFFVVVRRRFPLRDKISE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttttttgtcgaccgtcctatttttgcgtgggtgctggctatccttctcagc
ctgtgcggtatgttggcgatcaaatcattaccgctagaacagtatcccgatctggcaccg
cccagcgtaaggatcacagctaactaccccggtgcatcggcacagacgttggaaaatacc
gtcacacaggttatcgagcaaagcatgactgggctggataacctgatgtacatgtcctcg
gacagcagcaataccgggcagtcccgtattatgctgacctttgaagcaggtactgacccc
gatgaagcgcgtcagcaggtgcaaaaccagctgcaatccgctacccgtaagctgccgcag
gatgtgcagcaacagggggttaccgtaagtaaaacgggcgataccaatatcctgatggtc
gcgtttgtctctaccgatggcagcatggacaaacaggatatcgccgattatgttgctacg
aatattcaggagccgatcagccgcattagcggggtgggcgaggtcgattcctatgggtca
cagtatgcgatgcgcatcgggctagacccggccaaactgatggattatgcgctgacgacc
agcgacgtggtgcgggctatcgaatcgcagaacagtcaggtctcggtagggcaagtcggc
ggcgtgccgtcggtggataatcaggcgcttaacgccacgatcaacgcgcagtcactgctg
caaacgccacagcagttccgtgatatcacgctgcgcgtcaatcaagatggttctgcggtg
acgctggctaatgttgcggaagtggaactgggttctgaacgctatgattttctcagccgt
tttaacggtcaggccgcctctggtctgggcgtaaaactggcgtctggtgcgaatgagctg
gaaaccgataaacgcgtcagagaacgtatcgaggagctgtcgcagtacttcccacacggt
ctggaagccaaaatcgccttcgagacatccccttttgttaaagcctctatcaccgatgtg
gtgaaaactctgtttgaagcggtgctgctggtctttctggtgatgtacctgttcttacag
aatttccgtgccaccctgattcctacgattgccgtgccggtggtgttgctcggtacgttt
gccgtgctgtatgccttcggttttagcctgaatacgctgacgatgttcgcgatggtgctg
gcgattggcctgctggtggatgatgccattgtggtggtggaaaacgtggaacgggtgatg
agcgaagaggggctctcgccacgcgacgcgacgcgaaaatcgatggggcaggtgcaaggg
gcgctggtcgggattgcgctggtgctgtccgccgtatttgtaccgatggccttctttggc
ggcaccacgggggcgatttatcgtcagttctccatcacgattgtgacgtcaatgattctg
tcggtgctggtggcgatgatcctgacgcctgcactgtgtgcgacgctgctcaagccgctc
gctaaaggccaacaccacggtcgtaaagggtttttcggctggttcaaccgcagctttacc
cgcacgtcgctgaagtatgagcgcggcgtcggcaaaatattggtcagtagcggacgctgg
ctgctgctttatatgggtattatcgggattatggccttcctgtttttccggctgccgacc
tcgtttctgccgcaggaagatcgaggggtgttcacgacacaagtgcagcttccaccgggt
tcgacgcagcagcagaccttacaggtggtcaacaagatcgagcagtattatctcacgcag
gaaaaagacaccgtgacgtccgtgttttccaccattggctctgggccgggcggtaacgga
cagaacgtggcgcggctgtttgtgcgtcttaaagactgggatgagcgcaccacgccggag
agcagctcgtttgccgtgatcgaacgcgcgaccaaagcctttcgcgatatcaaggaagcg
cgcgtgttcgccagcagcccgccgtcaattaacggcttgggtagcgctgcgggcttcgct
atgcggttacaggatcgcggtggattggggcacgatgcgctgatggaagcgcgggatcga
ctgctgaacatggctgacagcaaccgcgaactgacgcgcgtgcgccacaacgggctggat
gacagctcgcaactgcggattcatatcgatcagcgcaaagcacaggcgctgggggtctcg
gtggatgacattaacagcacgctgaaaacgggctgggggtcgacctatgtcaatgatttc
cttgatcgtggtcgggtgaagaaagtctacgttcaggcggcggcgaagttccgtatgctg
ccggacgacatcagcaaatggtatgttcgcaataacagcggtggcatggtgccgtttagc
gcgtttgcacaaaccgtctgggaaaccggttcgccgcgtcttgagcgttacaacggctat
tcgtcgctggaaattgtcggcgaggcgatgccgggtgtcagtaccggcacggcgatgacg
atcatggaatcgctggtggcgaagctgccggaagggtttgggttggagtggacgggcatg
tccttacaggagcgactgagcggggcgcaggcaccggcgctgtatgccgtttcgctactg
gtggtgtttctgtgtatggccgcgctgtatgaaagctggacagtgccgttctccgtcatg
ctggtggtgccgatgggcgtgttgggggcgctggtagcgacctgggcgcgcggtctggaa
aacgatgtctactttcaggttgggctactgacggtagtcgggctatcggcgaagaacgcc
attctgattgtggaattcgccaacgagatgaaccagaaagggaaagatttggttgagtcc
acgctggaggcttcgcgccagcggttgcggccaatcttgatgacgtcgctggcatttatc
ttcggtgtcctgccgatggcgaccagcagcggtgccggctcggccagccagcatgcggtg
ggaacaggcgtgatcggcggtatgctggcggccaccttcctcgccatcttcttcgtgccg
ctgttctttgtcgtcgtgcggcgtcgtttcccgctgagagataagatctcggaatag
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integrated database retrieval system
