Pectobacterium polonicum: LW347_20475
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Entry
LW347_20475 CDS
T08488
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00521
Streptomycin biosynthesis
ppoo00523
Polyketide sugar unit biosynthesis
ppoo00525
Acarbose and validamycin biosynthesis
ppoo00541
Biosynthesis of various nucleotide sugars
ppoo01100
Metabolic pathways
ppoo01110
Biosynthesis of secondary metabolites
ppoo01250
Biosynthesis of nucleotide sugars
Module
ppoo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
ppoo_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LW347_20475 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LW347_20475 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
LW347_20475 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LW347_20475 (rffG)
00525 Acarbose and validamycin biosynthesis
LW347_20475 (rffG)
Enzymes [BR:
ppoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LW347_20475 (rffG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UVO08178
UniProt:
A0AAE9NQY7
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All DBs
Position
complement(4529865..4530938)
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AA seq
357 aa
AA seq
DB search
MALKRILITGGAGFIGSALVRYILTETQDSVVVVDKLTYAGNLSSLAPVADSERLAFEQV
DICDRAELDRVFKTYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQN
LADADKSAFRFHHISTDEVFGDLHGTDDLFTETTSYAPSSPYSASKASSDHLVRAWLRTY
GFPTVITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYK
VVTEGEIGETYNIGGHNERKNIEVVQTICELLEELAPNKPAGVAHYRDLITYVKDRPGHD
MRYAIDAGKIERELGWRPEETFETGMKKTVSWYLNNEKWWRSVQDGSYTGERLGLND
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaaacgtattttaattaccggtggtgccgggtttattggttcagcattggtc
agatacattctgactgaaacgcaggacagtgtcgttgttgtcgataaactgacttatgcg
gggaacctgtcttcgctggcaccggttgccgatagtgaacgtttggcgttcgagcaggtg
gatatctgcgatcgcgctgaactggatcgcgtcttcaagacctaccagcccgcgctggtg
atgcatctggcggcagaaagccacgtcgatcgctctatcgacggccccgcagcatttatc
gaaaccaacattgttggcacctataccatgctggaagcggcacgtcactactggcagaac
ctggctgatgcggacaaaagcgcgttccgttttcaccatatttctaccgatgaagtgttt
ggtgacctgcatgggacggacgatctgtttaccgaaaccacgtcttatgcgccgagcagc
ccttattcggcctcgaaagcgtccagcgaccaccttgttcgcgcctggctgcgcacttat
gggttcccgacggttatcaccaactgctcgaataactacggcccttaccactttccagag
aagctgatcccgctggtcatcctgaatgcggtcgcgggcaaaccgttaccggtttacggt
gacggcgcacaaattcgtgactggctgtttgtggaagaccacgctcgtgcgctgtacaaa
gtggtgacggaaggcgaaatcggcgagacgtataacatcggtggccacaacgaacgtaaa
aacattgaagtggtgcagacgatttgcgaactgctggaagagctggcaccgaataagcct
gctggcgtggcgcattatcgcgatctcattacctacgtgaaagaccgcccaggtcacgat
atgcgttatgcgatcgatgctgggaaaattgaacgtgaactgggctggcgtccagaagaa
acgtttgagacaggcatgaagaaaacggtcagttggtatctgaataacgaaaaatggtgg
cgcagcgtgcaggacggttcctataccggtgagcgtttagggctgaacgactaa
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