Pectobacterium polonicum: LW347_21675
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Entry
LW347_21675 CDS
T08488
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo00040
Pentose and glucuronate interconversions
ppoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LW347_21675
Enzymes [BR:
ppoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
LW347_21675
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
UVO08394
UniProt:
A0AAE9T2M7
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All DBs
Position
complement(4812630..4814864)
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AA seq
744 aa
AA seq
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MKRCSSQKCDFVRKHRSSRLAAVALTNALLFSFSTHAATESTPVWHGMAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLAPEDNADLSAPITIESRGGKIANTHDGLTFFYTQLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGVPRQEPLKEGYEEFPAASNMVMNAIM
TQDKKSHTEIKLQAILRNGVTQPWGNAGAKITKTSYQENVNLEQTPTFRLKLERTNDGFI
TSYAPKGTDNWVSKEVKGADVVTKLDKDHYYVGFFASRNAKIIVSNAQLTTAPAQTKASP
EFKVKAYDPLLQVMSSPKTTSENYVVQAKANYNGTIAVSQDGKSLGDAKQVKAGETFSLP
AKIAGNSAEFKLAYQPADGDDKAVKESTFKVEKVAYADAKNLYVSPQGSASNDGSKNAPL
DLSSAVAALPAGGTIWLNDGDYSAAEIPVSARGQQKAVKNLFTVGNKAVIHGLQLKASHW
HVKGIEITEKPFRIEGSYNTIERVLAHHADDTGIQVTSTADVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNVIRGAFSHNNIDDGFDLFNKIEDGANGVVVIENSIAMN
NTSNGFKMGGEGQPVAHQVKNSIAVGNKLDGFTDNFNPGALIVEDNIALDNERFNFIFRP
SPYSGPEKQGVFKNNVSLKTKAGKYDDAVVGNIDNTNYFIKGDRSVNAQGKEVTVNNFVS
VIVPETFTRDAKGNLVLGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcacaaaaatgtgattttgtacggaaacaccgttcttcacgcctc
gcagccgtcgcgttgacgaatgcattactcttcagcttcagtacacacgccgcgacagaa
tcaacccccgtctggcacggaatggcatttggtcagtcgacagatgtaaacttctcgtcc
aacgttctgccggaaaaaattggcgtcaacgatgtcaccatcaacggcaagaaattagcg
ccagaggataatgctgatttgtccgcaccgatcacgattgaaagccgtggcggaaagatt
gccaacacccatgacggattgacgttcttctatacgcagttgcctgccaatgtgaatttt
acgcttcagtctgatattacagtggaacagtttgggccagaaaatggtgccaaacctgcg
gctcaggaaggtgcagggattttggtacgcgatattatcggcgtgccacgtcaggaacca
ttgaaagaagggtatgaagaattccctgcggcgtccaacatggtgatgaacgccatcatg
acgcaggataaaaaatcgcataccgaaatcaagctacaagctattttgcgtaatggcgtc
acgcaaccgtggggcaacgcgggcgcgaaaattaccaaaaccagctatcaggaaaacgtc
aatctggagcagacaccgacgttccgtctgaaactggaacgtaccaacgacggcttcatt
acctcttatgcaccaaaaggcacggataactgggtatcaaaagaagtcaaaggtgcagat
gttgtcaccaagttggacaaagaccactactatgtcggtttctttgcctcccgtaacgcc
aaaatcatcgtcagtaatgcacagttgactacggcaccggcgcaaaccaaagcctcaccg
gaatttaaagtcaaggcttacgatccgttactacaggtgatgtcatcgcctaaaaccacc
agcgaaaactatgttgtacaggctaaagccaattacaacggtacgatcgccgtttcacaa
gacggtaaatctctcggtgatgccaagcaggtaaaagcaggtgagacgttctctctgcca
gcaaaaattgccggtaatagcgcagaattcaagctcgcttaccagcctgcggatggggat
gataaagcggtcaaagagagcacgttcaaggttgaaaaagtggcctatgcagatgccaaa
aatctgtatgtttcgccacagggttcagccagcaacgacggcagtaaaaatgcaccgctc
gatttatccagcgccgtcgccgctctgccagcaggcggcacaatttggctcaacgatggc
gattacagcgcggctgaaatccctgtcagcgcccgcggccagcaaaaagccgtcaagaac
ctgtttaccgtcggtaataaagccgtcattcacggcttgcaactgaaggcaagccattgg
catgttaaagggattgaaatcaccgagaaaccgttccgtatcgaaggaagctacaacacc
atcgaacgcgttctggcgcaccacgctgacgataccggtattcaggtaacttcaacggcc
gatgtaggcagaccactgtgggctagccataacctgatcctgaactcagaatctcacagc
aaccaggaccctggcaaaattaacgctgacggttttgcggtaaaaatgcgtgtcggtgaa
ggcaacgtaatccgcggcgcattctcacacaacaacatcgatgacggcttcgacctgttt
aacaaaattgaagacggtgcaaacggcgttgtggtgatcgagaattcaattgctatgaac
aacaccagcaatggcttcaaaatgggtggcgaaggtcagccagtggcgcatcaggttaaa
aacagtattgccgtgggtaacaaacttgatggtttcactgataacttcaaccctggtgca
ctgatcgttgaagacaacatcgcgttagataatgaacgctttaactttattttccgtcca
agcccttactctggcccggaaaaacaaggcgtcttcaagaacaacgtttcgctgaaaacc
aaagcgggtaaatatgatgatgcagttgtcggcaatatcgataacaccaactacttcatc
aaaggcgaccgttcggttaacgcgcaaggtaaggaagtcacagtaaataacttcgtttca
gttatcgtccctgagacgtttacgcgtgatgccaaaggcaatctggtacttggcgacttc
ctgaagaaaaaataa
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