Pectobacterium polonicum: LW347_21740
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Entry
LW347_21740 CDS
T08488
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K10018
octopine/nopaline transport system substrate-binding protein
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LW347_21740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_21740
Transporters [BR:
ppoo02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
LW347_21740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
Lig_chan-Glu_bd
SprB
NMT1
Motif
Other DBs
NCBI-ProteinID:
UVO08407
UniProt:
A0AAE9T1J2
LinkDB
All DBs
Position
complement(4828656..4829483)
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AA seq
275 aa
AA seq
DB search
MGQLKDNTAHRASLFSRCITPLLLFSVFSATSSEATAKLTIAMDGASPPYNYSTSNGKIE
GFEVDLINDLCKRINEECTVISQSWEGIIPALLAKRYDAIMSGISITEERKKQIDFTHPY
STTPSWLVGSEALFKNITTSDAAIAALKGKSLGVQRGTIQQAIADNTFRPHGIEIKEYDT
DDNLKIDLEAGRLDAVLGVSVNLTPLLEGQHQDTFIRFGPEIADEGGIGIALRKDEQALK
EKLNNAIDAAIHDGTVSALSIKWLKFDSIPKTPSA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagttaaaagacaataccgcgcatcgtgcgagtttattctcacggtgcattacg
ccgttattattgttctccgtattttcggctacgtcatcagaggcaacggccaaattaacc
attgcgatggatggcgcttctccgccttataactacagtacctcaaacggaaaaatcgag
gggtttgaagtagacctcattaacgacctgtgcaaaagaatcaacgaagaatgcaccgtc
attagccagtcctgggaagggattattcctgcactgctcgccaaaagatacgatgccatc
atgtcgggaatttctatcacggaagagcgaaaaaaacagatagattttacccatccttat
tcaaccacccccagttggctggttggttcagaggcgctgtttaaaaacatcaccacatca
gacgccgctatcgccgcgcttaaagggaaatcactcggcgtacagcgcgggaccattcag
caagcgattgccgataacacttttcgccctcatggcatcgagattaaggaatacgacacc
gacgataacctgaaaatcgatctggaagcgggacgtttggatgccgtattgggcgtatca
gtcaatctcactccgttgttggaaggccaacatcaggacacctttattcgattcggtcca
gaaatcgccgatgagggcggtatcggtatcgcgctgcgtaaagacgaacaagccttaaag
gaaaaactcaataacgccattgatgccgcaatccatgatggcacggtatcggcgctatcc
atcaaatggctgaagtttgattccatccccaaaacgccgtcagcatga
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