Pectobacterium polonicum: LW347_21835
Help
Entry
LW347_21835 CDS
T08488
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
ppoo
Pectobacterium polonicum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_16
TPR_14
DEP
Motif
Other DBs
NCBI-ProteinID:
UVO08426
LinkDB
All DBs
Position
4849078..4851540
Genome browser
AA seq
820 aa
AA seq
DB search
MSVVHSHSSRLNPILFNLLKSFVYFSISVGVAAAESHYDTLISNARQGDISPATSWLDGQ
SRNRVLTTAEVTDWLLINGWAGNDAEAIRIWQTYSPTMSLPDPALRAAAKSYRNLRQWPS
SVELWQRVLQRTPRDDDARSGLILTLADAGQTKRSLELATSRVKREPTAHHWRELAWVQR
IAGKHTDSLFSIMQAMRHAPQDKTLLSDYSDILSGNTISTPALSALKDSKLHVFQTDERQ
RPRELEAAAELVRLAFITSTTENERFVVADRALARYDSLMNQWRALPSAKTSYRHARIDR
LGALLVRYRMEEIISEYQSLLKEGDIPGYARRWVASAYLYLKQPEKAEQILRSVIQEDSA
QRSQVALQGDFFYSILESEKVEQAAQLSAQAEEKTPYKKRVYGLPTFIPNDDWVDIKYLR
IQSLISHNDLPTAQRLVESLASSGPGNQALSISLAGVYLNRGWPRRAEALLKRAELLDAR
SFRLETYQGLTALELQEWHQLGELTDDTVARYPDDFSVKRLARLRQVHHMAELRIAGTQG
VKSDSPAKGMNDTDIDAVLYSPPFADHWRVFSGGAFNQSDFTEGRAIHRTLRGGVEFTNR
DNWAEAEFSHRNFGFGSDIGARLSYRHDINDVWRVGLNAERLMRSTPLRALKNGVTANGV
GGYVRWRQSERRAWQADLSNGWFSDGNRRQEYTLSGQERVFASPSFTLDFTPSINWGSNS
KQAVSYYNPRNDVAVLPAFTLDHLLYRHYQTEWHQEIHAGVGRYWQKGESAGAITTLGYG
QRVRWNDVLDMGVSAQWDKRPYDGKREQNVSLSFDLNYRF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgttcattctcattcaagcagactcaatccaatattatttaacttacttaaa
tcattcgtttatttttccatttctgtcggcgtcgcggcggcagaatctcactatgacacg
ttaattagcaacgcccggcagggtgatatctctcctgcgacgtcatggcttgatgggcaa
tccaggaatcgcgtactaaccactgccgaggtgaccgactggctgcttattaacggttgg
gcgggaaatgacgcggaagcgatcagaatttggcaaacctattcacccacgatgtcacta
cccgatccggcactgagagcggcggctaagtcctaccgtaatctccgtcagtggccgtca
tcggtggaattatggcagcgggttttacaacgcactccacgggatgatgatgcacgtagt
ggtttgatactcaccctcgctgatgccgggcagacaaaaaggtcgctggaattggctacg
tctcgtgttaagcgtgagccaacagcgcaccattggcgtgaattagcatgggtacagcgt
atcgcggggaagcatacggattccctcttttctatcatgcaggccatgcgccacgcaccg
caggataaaacactgctttctgattacagcgatattctttccggtaatacgattagcaca
cctgcattgagcgcgttgaaagacagcaaacttcatgtcttccagactgatgaaaggcaa
cgcccgcgagagctggaggcggcggctgagctggttcgtctggcgtttatcacgtccaca
acggaaaacgagcgcttcgttgtggcagatcgcgctttggctcgttatgacagcttgatg
aatcaatggcgagcgcttccttcggcaaaaaccagctatcgccatgctcgcattgatcgg
ctcggtgcgttgctcgtccgctatcgcatggaagaaattatttcggaataccaatcactt
ctcaaagagggggatattcccggctatgcacgacgctgggtggcttcagcctatctctat
ctgaagcagcctgaaaaagcagagcagattctccgttcagtaatacaagaagactctgct
cagcgctctcaggtagcgctgcaaggcgattttttctacagcatcctggagagtgagaaa
gttgaacaggcagcgcagctgtcagctcaagctgaagaaaaaacgccttataagaaacgt
gtttatggcctgccaacctttatacctaacgacgattgggttgatatcaaatacctgcgt
atacagtcgctgatttcccataacgatctgccgactgcgcaacgattggtggaaagcctg
gcctctagtgggccagggaaccaagcgctgagcatcagtttagccggggtttatctaaac
aggggatggccgcgtcgtgccgaagcgttattaaagcgggctgagctgttggacgcgaga
tcgttccggttggaaacctatcaagggctcactgcattggaattgcaggagtggcatcag
cttggtgagctgaccgacgatacggtggctcgctatccagatgatttttctgtgaaacga
ttagcgcgtttgcgtcaggttcatcacatggcggagctgcgtattgccgggactcagggc
gtcaagtctgacagtccagccaagggaatgaatgacacggatattgatgccgtgctctat
agccctccgtttgccgaccattggcgagtgttctctggaggggcttttaatcaaagtgat
ttcacggaaggacgagctattcatcgcactctacgcggcggtgtggaatttaccaaccgc
gataattgggctgaggctgagttttcacaccgaaattttggatttggctctgacattggc
gcgcgtctctcctatcggcatgacattaatgacgtttggcgtgtcggcctgaatgctgaa
cggctaatgcgcagcacgccgctacgcgcacttaaaaatggtgtaacggcgaatggcgtc
ggagggtatgtccgttggcggcaaagcgagcgacgcgcatggcaagcagatctgtcgaac
gggtggttttctgatggcaacagacgtcaggaatatacgctgagtgggcaagagcgagtc
tttgcatcaccgtctttcaccctggatttcactccgtcgatcaattgggggtcaaacagc
aagcaggccgtttcttattacaacccgcggaatgatgtggccgtgctacccgccttcacc
ctcgatcacctgctttaccgacattaccagacggagtggcatcaagagatacatgctggc
gtagggcgttactggcaaaagggtgaatccgcaggggctatcaccacgctcggatatggg
caaagagtacggtggaatgacgtactggatatgggagtgagtgctcagtgggataagcgg
ccttacgacggtaagcgggagcagaacgtgtcgctgtcttttgatttgaattatcggttt
tga
DBGET
integrated database retrieval system
