Pseudodesulfovibrio portus: JCM14722_00970
Help
Entry
JCM14722_00970 CDS
T08636
Name
(GenBank) HDIG domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppor03019
]
JCM14722_00970
Messenger RNA biogenesis [BR:
ppor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JCM14722_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HD_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BDQ32555
UniProt:
A0ABM8AME7
LinkDB
All DBs
Position
complement(95206..96204)
Genome browser
AA seq
332 aa
AA seq
DB search
MAPGQPVDDLFLLASANQAQSRNGPYWNITFQDATGKIDGKIWSPKSQDYPSLEPGLVVR
VKGFVESYRDKSQLRVDHMAILEADDPDVDLADFLPTSCVPPEELMEAVEDLVTEHMKHG
PWKKFCKKVLGNTEIRSRMLTAPGAKTVHHAYVGGLLEHTLQVSRACMALCDVYPALDRQ
TLLAGAIFHDLGKAWELSGGPANDYTDEGRLFGHIQIGVEKLEPFLKKSKTLDDGLKMHL
KHLITSHHGEHEFGSPVRPKTPEAFILHFADNMDAKLNIIDQAYAEMDKTGQDWSPYMRF
LERNVYRPTQTPDKSKKNNGKPENQCLLPLKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcccccggccaaccggtcgacgacctctttctcctggcctcggccaaccaggcgcag
tcccgaaacggcccttactggaacatcaccttccaggatgcaaccggcaagatcgacggc
aagatatggagccccaagagccaggactacccgtccctggaacccgggctcgtcgtgcgc
gtcaaaggttttgtcgagagctatcgcgacaagagccagcttcgggtggaccacatggcc
atcctcgaagccgacgaccccgatgtggacctggccgatttcctgcccacctcctgcgtg
cctcccgaagaactgatggaggccgtcgaggatttggttaccgagcacatgaagcacggg
ccctggaaaaaattctgcaagaaggtcctgggcaacacggaaatccgaagccggatgctg
accgcgccgggtgccaagaccgttcaccacgcatacgtcggcggcctgctcgagcacacc
ctccaggtgtcccgcgcctgcatggccctgtgcgacgtgtatccggccctggaccgccag
accctgctcgcaggggccatctttcatgacctcggcaaggcctgggagttgtccggcggc
ccggccaacgactacaccgacgagggacggctgttcggccacatccagatcggcgtggaa
aagctcgagccgttcctgaaaaagagcaagaccctggacgatggcctcaagatgcacctc
aagcacctgatcaccagccaccacggggaacacgagttcggctctccggtccgcccaaag
acgcccgaggccttcatcctccacttcgcggataacatggacgccaaactgaacatcatc
gaccaggcatacgccgaaatggacaagaccgggcaggactggtcgccctacatgcgcttt
ttggagcgaaacgtttatcgccctacgcaaacccctgacaaatcgaaaaagaacaacggc
aagccggagaatcaatgtttgttacctttgaaggcatag
DBGET
integrated database retrieval system
