Pseudodesulfovibrio portus: JCM14722_02330
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Entry
JCM14722_02330 CDS
T08636
Symbol
lysA-1
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor00300
Lysine biosynthesis
ppor00470
D-Amino acid metabolism
ppor01100
Metabolic pathways
ppor01110
Biosynthesis of secondary metabolites
ppor01120
Microbial metabolism in diverse environments
ppor01230
Biosynthesis of amino acids
Module
ppor_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JCM14722_02330 (lysA-1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JCM14722_02330 (lysA-1)
Enzymes [BR:
ppor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JCM14722_02330 (lysA-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDQ32691
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Position
240755..241993
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AA seq
412 aa
AA seq
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MHHFEYRDGVLFAEEVSVTKLTENYGTPLYIYSAATFRRHFKAFDSAFDGLDHLTCFSVK
ANSNLSVLRMLAEEGAGMDIVSGGELYRALKAGVAPEKIVYSGVGKRESEIRDALSAGIL
MFNVESVAELIKIDEVAGLKGVKAQVSFRINPDVDPQTHPYISTGMAKNKFGLDIENSFK
AYEMAAKLDNIEPVGMDCHIGSQLTSIEPFLEALDKLLDFYEKLKGIGIKIKYLDLGGGL
GIPYDEEQPPHPTEFGQALSAKLKGLPLKVILEPGRVIAGNAGIMVTKVLYTKSNPTKNF
LIVDAAMNDLVRPSLYGSYHRIGEVEEHGRAPMVYDVVGPICESGDFLARDRELPGIKQG
ERLVLYSAGAYGFTMSSNYNTRPRACELIVDDDKVIVARKRETYEDIVANEL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttcgaatacagagacggcgtgctgttcgccgaagaggtcagcgtcaccaag
ctgaccgagaattacggcaccccgctctacatctattccgcagcaacgtttcgcaggcat
ttcaaggccttcgactctgcttttgacggattggaccacctgacctgcttttcggtcaag
gccaactcgaacctgtcggtcctgcgcatgctggccgaagaaggcgcgggcatggacatc
gtatccggcggagaactctatcgcgctctcaaggcgggcgtggctccggaaaaaatcgtc
tactccggagtgggcaagcgcgaatccgaaattcgcgacgccctgagcgccgggattctg
atgttcaacgtggagtccgttgccgagctgatcaagatcgacgaggttgcggggctcaag
ggcgtcaaggcgcaggtcagcttccgcatcaacccggatgtggacccgcagacacaccct
tatatttccaccggcatggccaagaacaagttcggcctggacatcgagaattctttcaag
gcctacgagatggccgccaagctcgacaatatcgagcctgtgggcatggactgccacatc
ggctcccagctgacgagcatcgagcctttcctggaggcgctggataagctcctcgatttt
tatgaaaaactgaaaggaatcggcatcaaaatcaagtatctcgatctggggggcggcctt
ggcattccctacgacgaagaacagccgccccaccccaccgagttcggccaggctttgagc
gccaagctcaagggactgccgctcaaggtgatcctggaaccgggacgggtcatcgcaggc
aacgcgggcatcatggtcaccaaggtgctttacaccaagtccaacccgaccaagaatttc
cttattgtggacgcggccatgaacgatctggtccggcccagcctgtacggctcttaccac
cgcatcggcgaggtcgaggaacacggtcgtgcgccgatggtctatgacgtggtcggtccc
atttgcgaatccggcgacttcctggccagggatcgcgagctgcccggcataaagcaaggg
gaacgcctcgtgctttactctgccggagcctacgggttcaccatgtcttccaactacaat
acgcggccgcgggcctgcgagttgatcgttgacgacgacaaggttatagtcgccaggaaa
cgtgagacatatgaagatattgtagccaacgaactgtag
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