Pseudodesulfovibrio portus: JCM14722_02880
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Entry
JCM14722_02880 CDS
T08636
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppor03032
]
JCM14722_02880
03036 Chromosome and associated proteins [BR:
ppor03036
]
JCM14722_02880
03400 DNA repair and recombination proteins [BR:
ppor03400
]
JCM14722_02880
DNA replication proteins [BR:
ppor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JCM14722_02880
Chromosome and associated proteins [BR:
ppor03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
JCM14722_02880
DNA repair and recombination proteins [BR:
ppor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JCM14722_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
DUF5666
Motif
Other DBs
NCBI-ProteinID:
BDQ32746
UniProt:
A0ABM8AN04
LinkDB
All DBs
Position
297007..297282
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIKALSEQKKMHVDEATKVVGAFVDSVKEALLRGDRVEIRGFGSFKIKDYEGYTG
RNPKTGSVVQVKPKKLPFFRPGKELKEYINQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagcgaattgatcaaggctctgtctgaacagaaaaaaatgcacgtggacgaa
gccaccaaagtggttggagccttcgtcgattccgtcaaggaagcccttctccgtggcgac
cgtgtcgaaatcagaggttttggcagcttcaagatcaaggactatgaagggtataccgga
cgcaatccgaagaccggttccgtcgtccaggtcaaacccaagaagcttcctttcttccgt
cccggtaaagagctgaaggaatacatcaaccagtag
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integrated database retrieval system
