KEGG   Pseudodesulfovibrio portus: JCM14722_02990
Entry
JCM14722_02990    CDS       T08636                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ppor  Pseudodesulfovibrio portus
Pathway
ppor02020  Two-component system
ppor02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ppor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JCM14722_02990 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    JCM14722_02990 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppor03021]
    JCM14722_02990 (rpoN)
Transcription machinery [BR:ppor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JCM14722_02990 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID
Other DBs
NCBI-ProteinID: BDQ32757
LinkDB
Position
complement(304593..306002)
AA seq 469 aa
MGLELRQQLKLSQQLVMTPQLQQAIKLLQLSRLELLETVQQELMENPFLDELETEAEVHD
SSEKLTESQAEEELVRNADWENYLGEFSSTSKQATARDAEVPEDGLSFEARLASKPSLEG
HLNWQMRLSNFTDQEIAISEIILGNLDTNGYLQASVDEIRLMVQASAEEVEDLLMRIQRL
DPVGVGARTPQECLLVQMEVLGLDDPILVSLVKDHLEDLEKNRYKPLARKFKLSMDELKE
YLDLLQTLDPMPGTNFSSNEPHYVSPDVYVYRYGEDFVIILNEDGLPRLQMNTFYMDSMK
GAADKEKEYFQEKMRSAAWLMKSLYQRQRTLYKVVESIVRFQREFFIDGVTKLKPLILKE
VAEDIEMHESTVSRITTNKYVSTPHGIYELKFFFNSALDLDDGSQVGSESVKALIKQMIA
GEDTKKPLSDERIGEILKDKLEVNIARRTVAKYRSAMGIPSSSKRKQYF
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgggtttggaactcaggcaacaactcaaactttcccagcaactggtcatgacgccgcag
ttgcagcaggctatcaagctgctgcagttgtctcgtttggagctgcttgaaaccgtgcag
caggaactcatggagaacccgtttctcgatgagttggaaaccgaagccgaagtgcacgat
tcctcggagaagctgaccgaatcccaggctgaagaagaactggtgcgcaatgcggactgg
gagaactatctgggcgaattttccagcacgtccaagcaggccacggcccgtgatgccgaa
gtcccggaggacggcctctccttcgaagcccgcctggcgtccaagccctcccttgaaggc
cacctgaattggcagatgcggctatccaattttaccgaccaggagatcgccatcagcgag
atcatcctgggcaatctcgacaccaacggctatcttcaggcgtcggtggacgagatacgg
ctgatggtccaggcttccgcagaggaagtcgaggacttgctgatgcgtatccagcgcctg
gacccggtcggggtcggcgcccgtactccacaggagtgtcttctcgtccagatggaagtt
ctcggcctcgatgatccgatcctggtctccctggtcaaggaccatctggaggacctggag
aagaaccgctacaagcccctggcccgcaagttcaagttgtccatggacgagctcaaggag
taccttgacctcctgcagacgctggaccccatgccgggcaccaatttttccagcaacgag
cctcattacgtcagcccggacgtgtatgtttaccgatacggagaggatttcgtcatcatc
ctgaatgaggatggcctgccccggttgcagatgaacaccttttacatggattccatgaaa
ggggccgccgacaaggaaaaggaatatttccaggaaaagatgcgttctgctgcatggctc
atgaaaagcctgtaccagaggcagaggacgctgtataaagtagttgagagcattgtccgc
tttcagcgggaattcttcatcgatggcgtgacaaagctcaaaccattgattctcaaggag
gtggccgaggatatcgagatgcatgaatccaccgtcagtcgtatcactaccaacaagtac
gtctcgacgccgcacgggatctacgaactgaagttcttcttcaattcggccttggatctt
gatgacggttcccaggtgggttcggagagcgtcaaggcgctcatcaagcagatgatagca
ggtgaagatacgaagaagccgctgagtgatgaacggatcggtgaaatcctcaaggacaag
ctcgaggtgaacatcgcccggcgcacggtcgccaagtatcgctcggccatgggcatccct
tcgtcttccaaacgcaagcagtatttctaa

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