Pseudodesulfovibrio portus: JCM14722_12390
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Entry
JCM14722_12390 CDS
T08636
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor00300
Lysine biosynthesis
ppor00550
Peptidoglycan biosynthesis
ppor01100
Metabolic pathways
ppor01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JCM14722_12390 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JCM14722_12390 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JCM14722_12390 (murF)
Enzymes [BR:
ppor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
JCM14722_12390 (murF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BDQ33697
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Position
1328179..1329570
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AA seq
463 aa
AA seq
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MNMTLADIERCLGNMAEEGHQDIRVASVKTDSRTVEAGDLFVCIAGENYDGHEFAPQAAR
SGAAAIVASRMLDDVDAPVIMVRDSLGALGRLAACWRDMCGAKLVAVTGTAGKTTVKEML
YAVVSRKFETAKNYRNFNNQIGLPMSMLKAAAKQEVWIMELGISRKGDMEELAPVASPDL
AVITNVGPGHLEGLGNEAGVAQAKTALLRYLRPNGRAVVCADYPLLWDAAREIVDAPIGF
STNANSDTSYVASFLGGSDTENWGRFRLKTPEGDGELTAPFCGEHYAENLACVAAAAHQL
GLSRDDVIKGVRDMAVDGQRFCCKVGGGVTVIDDTYNANPLSMARSIRTATTMADEAPLV
LVLGDMRELGAEATRRHEELGTLVAEAAPAAVFYKGDHLADVARTCGGAVIPLTTPDEFL
RAWRETGIDRGVVLVKGSRSLKMEEYANALCRELNAGAPGGNK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatgaccctggccgatattgaacgctgcctcggcaacatggccgaagagggccac
caggacatccgcgtcgcttcggtgaagacggactcgcgcaccgtcgaggcgggcgacctg
ttcgtgtgcatcgccggggagaactacgacggccacgagttcgcaccccaggccgccagg
tccggtgcggcggccatcgtggcctcgcgcatgctggacgacgtggacgccccggtgatc
atggtccgcgactcgctgggcgcgctgggtcggctggccgcctgctggcgcgacatgtgc
ggggccaagctggtggccgtcaccggcacggcgggcaagaccacggtcaaggagatgctc
tacgccgtggtgtcccggaaattcgagacggccaagaactaccgcaatttcaacaaccag
atcgggcttcccatgtccatgctcaaggccgcggcaaaacaggaagtctggatcatggag
ctgggcatctcccgcaagggcgacatggaggagctggctccggtggcctcgcccgacctg
gccgtcatcaccaacgtcggccccggccacctggaaggcctcggcaacgaggcgggcgtg
gcccaggccaagaccgccctgctccgctacctgcgccccaacggccgggccgtggtctgc
gcggactacccgctgctctgggacgcggcccgagaaatcgtggacgcgcccatcggattt
tccaccaacgccaattccgacacctcctatgttgcctcgttcctcgggggctcggacacc
gaaaactggggacgtttccggttgaagacccccgagggcgacggcgaactgaccgccccg
ttctgcggcgaacactacgccgagaacctggcctgcgtggccgctgccgcgcaccagctg
ggactgtcccgcgacgacgtcatcaaaggcgtcagggacatggccgtggacggccagcgg
ttctgctgcaaggtgggaggcggcgtcacggtcatcgacgacacatacaatgccaacccc
ctgtccatggcccgatccatccgcacggccacgaccatggccgacgaggccccgctggtc
ctggtgctgggcgacatgcgcgagctgggcgcagaagcgacccgacgccacgaggagctg
ggaaccctggtggccgaggccgccccggcagcggtgttctacaagggcgaccacctggcc
gacgtggcccgcacctgcggcggcgccgtgatcccgctgaccacgcccgacgaatttctt
cgagcctggcgcgaaacgggcatcgaccggggcgtggtcctggtcaagggttcgcgctcc
ctaaaaatggaagagtacgccaatgcgctctgccgcgaattgaacgcgggagcacctgga
ggcaacaaatga
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