Pseudodesulfovibrio portus: JCM14722_13560
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Entry
JCM14722_13560 CDS
T08636
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor00541
Biosynthesis of various nucleotide sugars
ppor01100
Metabolic pathways
ppor01250
Biosynthesis of nucleotide sugars
Module
ppor_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JCM14722_13560 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppor01005
]
JCM14722_13560 (hldD)
Enzymes [BR:
ppor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JCM14722_13560 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
ppor01005
]
Core region
JCM14722_13560 (hldD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
BDQ33814
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All DBs
Position
complement(1448750..1449730)
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AA seq
326 aa
AA seq
DB search
MYIVTGGAGFIGSAMVWKLNRMGIDDILVVDNLSTSDKWKNLVGLRYQDYLHRDQFLKFM
LEGDDPFETQAVIHMGACSSTTELDADFLMENNYRYTQYVCRFCLDHDARFINASSAATY
GNGEFGFNDAHEGIDRLNPLNMYGYSKQLFDLWAKDANVLDRIVSLKFFNVFGPNEYHKD
DMKSVICKAHSQILETGALKLFKSYRDEYPDGGQKRDFVYIKDCVDIMAWFLENPDKNGI
FNIGTGTARTWNDLANSVFAALGREPNIEYIPMPESIRDKYQYFTQADMDKLRSAGYDGE
MTTLEDGAKDYVQNYLDKEDRYLKSR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtacatagtcacgggcggcgcgggattcatcggaagcgccatggtctggaaactcaac
cggatgggcatcgacgacatcctggtggtcgacaacctgtccacttcggacaagtggaag
aatcttgtcggcctgcggtatcaggactatcttcaccgcgaccagttcctcaagttcatg
ctggagggggacgacccgttcgagacccaggcggtgatccacatgggcgcctgctcctcc
accacggagctcgacgccgacttcctcatggagaacaactaccgctacacccagtacgtc
tgccgcttctgcctggatcacgacgcccggttcatcaacgcctcctcggcggccacctac
ggcaacggcgagttcggcttcaacgacgcccacgagggcatcgatcggctcaacccgctg
aacatgtacggctactccaagcagcttttcgatctctgggccaaggacgccaatgtcctt
gaccgcatcgtcagcctcaagttcttcaacgtcttcggccccaacgagtaccacaaggac
gacatgaagtcggtcatctgcaaggcccactcccagatactggagaccggcgcgctcaag
ctgttcaagtcctaccgcgacgagtaccccgacggcggccagaaacgcgacttcgtgtac
atcaaggactgcgtggacatcatggcctggttcctggagaatccggacaagaacggcatc
ttcaacatcggtacgggaactgcaaggacatggaatgacctagccaactcggtgttcgcg
gccctgggaagggagccgaatatcgagtatatccccatgccggaatccattcgcgataaa
taccagtattttacgcaggccgacatggacaagctcaggtctgccgggtatgacggggaa
atgacgaccctggaagacggcgccaaggactacgtgcagaattacctggacaaagaagac
cgctatctcaagtcccgctag
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