Pseudodesulfovibrio portus: JCM14722_15530
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Entry
JCM14722_15530 CDS
T08636
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppor03009
]
JCM14722_15530 (rimO)
Enzymes [BR:
ppor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JCM14722_15530 (rimO)
Ribosome biogenesis [BR:
ppor03009
]
Prokaryotic type
ribosomal protein modification factors
JCM14722_15530 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
AnmK
Motif
Other DBs
NCBI-ProteinID:
BDQ34011
UniProt:
A0ABN6RX68
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All DBs
Position
1648002..1649321
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AA seq
439 aa
AA seq
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MNGNPEKSIRVHTISLGCPKNRVDTERLLGALGPAMVAVDTVAEADLALINTCGFIQPAT
EESIATILDTVREADEAEGKRPLVCVAGCLVSRYGQDLKDGLPEVDLWLNTEEIELWPAM
AREALAAQTVEGLPRNLSTAPSYAYLKVSEGCSHNCRFCTIPSIRGPHKSWPVEFLLDEA
RQLAGQVPEIIVVGQDSTAYGSDLGDGHDLPALLRGLADIPALEWLRIMYLYPAGLTESL
LTLLKGTGKPFLPYFDIPLQHAHPDVLGSMGRPFARNPEKVIDRVRSFFPEAALRTTFIV
GYPGETDEHFAALMDFVRRTRFHHLGVFPYWAEDGTPAAEMDNQVDDEVKIQRRDALMAL
QAEISAEIMEGYVGETVDVLIERESDEWPGLYIGRAWFQAPDVDGVTYVSAPPDTRLELG
TIVPVDIEKADTYDLSGLV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaatcccgaaaaatccatacgcgtccacaccataagcctgggctgccccaag
aacagggtggacacggagcggctgctgggcgccctggggccggccatggtcgcggtggat
accgtggccgaggctgacctggcgctgatcaacacctgcggattcatccagcccgccacc
gaggagtccatcgccaccatcctcgacaccgtgcgcgaggcggacgaggccgagggcaaa
cgcccgctcgtctgcgtggccgggtgcctggtctcgcggtacggccaggacctcaaggac
gggttgcccgaggtggacctgtggctgaacaccgaggaaatcgagctgtggcccgccatg
gcccgcgaggcgctggccgcgcagaccgtggaggggctgccccggaacctgtccacggcc
ccgagctatgcctacctcaaggtctccgaggggtgttcgcacaactgccggttctgcacc
atcccgtccatacgcggcccgcacaagagctggcccgtggaattcctgctggacgaggcc
cggcaactggccgggcaggtgccggaaatcatcgtggtgggccaggactccacggcctac
ggctcggacctgggcgacggccacgacctgcccgccctgctccgggggctggccgacatc
ccggcccttgagtggctgcgcatcatgtatctctaccccgccgggctgaccgagtccctg
ctgaccctgctcaagggaaccggcaagccgttcctgccctacttcgacatcccgctccag
cacgcccacccggacgtgctcggctccatgggccgcccgttcgcccgcaacccggagaag
gtcatcgaccgggtgcgctcctttttcccggaagccgccctgcgcaccaccttcatcgtg
ggctatcccggagagacagacgaacactttgcagcgctcatggatttcgtgcgccggacg
cgcttccaccacctgggcgtgttcccctactgggccgaggacggcacccctgccgccgag
atggacaaccaggtggacgacgaggtcaagattcagcgccgggacgcgctcatggcgttg
caggccgagatcagcgccgaaatcatggaaggctacgtgggcgagaccgtggacgtgctc
atagagcgggaatccgacgaatggcccggcctgtacataggccgcgcctggttccaggcc
cccgacgtggacggggtgacctatgtcagcgctccgcccgacacccgacttgaactcggc
accatcgtcccggtggatattgagaaggccgacacctacgacctgtcagggttggtgtag
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