Pseudodesulfovibrio portus: JCM14722_18380
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Entry
JCM14722_18380 CDS
T08636
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor00230
Purine metabolism
ppor01100
Metabolic pathways
ppor01110
Biosynthesis of secondary metabolites
Module
ppor_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
JCM14722_18380 (purD)
Enzymes [BR:
ppor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
JCM14722_18380 (purD)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp
LAL_C2
ATP-grasp_2
RimK
ATP-grasp_5
ATP-grasp_3
ATP-grasp_4
GSH-S_ATP
DUF2007
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
BDQ34296
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Position
complement(1948673..1949950)
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AA seq
425 aa
AA seq
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MKILVVGSGGREHALCWKLAQNPKVETILCAPGNGGTAQVGENIAVKDDDIPALVALAKT
EEVDLVVAGPELPLVLGLENALRQEGIPCFGPNAFAANLEGSKAFSKNVMADAGVPTAPF
RVCDDYDEAVAFIREKGAPIVVKADGLAAGKGVIVASSEEEAIEAVHEMMIKKAFGSAGD
RVVIEEALAGEEASFLCFCDGTHYAMLPSSQDHKAVYEGDTGPNTGGMGAYSPAPILPKE
KYEETAELCIKPILRHLAAKGEPFKGVLYAGLMYTENGPSVLEYNVRFGDPECQPLLMRL
ETDLLEIMFACIDGKLDQIEVKSSPQTACGVVMAAAGYPGSYPKGMEITGLDEADALDGV
KVFQAGTKVDGDRIVTSGGRVLCVTALGDDLAAAQKKAYEAVAKVHFDNSYYRRDIADKG
LKRLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattggttgtcggttccggtggtcgcgagcacgcgctgtgctggaagcttgcc
cagaatcccaaggtcgagaccattttatgcgcgccgggcaacggcggcacggcccaggtg
ggcgagaacatcgcggtcaaggacgacgacattccggccctggtcgcgctggccaagacc
gaggaagtcgacctggtggtggccggccccgagctgccgctggtgctcgggctggaaaac
gcgctcaggcaggaaggcatcccgtgcttcgggcccaacgcctttgccgccaacctggaa
gggtccaaggccttttccaagaacgtgatggccgacgcgggcgtgcccaccgctccgttc
cgggtctgcgacgactatgacgaggccgtggcctttatcagggaaaagggcgcgcccatc
gtggtcaaggccgacggcctggccgcaggcaagggcgtgatcgtggcctcctccgaggaa
gaggccatcgaggccgtgcacgagatgatgatcaagaaagccttcggctccgccggggac
cgcgtggtcatcgaagaagccctcgcgggcgaagaggcatccttcctgtgcttctgcgac
ggcactcactacgccatgctgccttccagccaggaccacaaggccgtttacgaaggcgac
accggccccaacacggggggcatgggcgcatactccccggccccgatcctgcccaaggaa
aaatacgaggagaccgccgagctgtgcatcaagcccatcctgcgccacctggccgccaag
ggcgagccgttcaagggcgtgctctatgccgggctgatgtacaccgagaacggcccgagc
gtgctcgaatacaacgtccgcttcggcgacccggaatgccagcccctgctcatgcggctt
gagacggacctcctggagatcatgttcgcctgcatcgacggcaagctcgatcagatcgag
gtcaagtcctccccgcagaccgcgtgcggcgtggtcatggccgccgcaggctatcccggc
tcctaccccaagggcatggagatcaccggcctggacgaggccgacgccctggacggggtc
aaggtcttccaggcgggaaccaaggtggacggcgacaggatcgtcacctccggcggccgc
gtgctctgcgtcaccgcgctgggcgacgacctggcggccgcccagaaaaaggcctacgag
gccgtggccaaggtccacttcgacaacagctactaccgccgcgacatcgccgacaagggc
ttgaagcggctcaaatag
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