Pseudodesulfovibrio portus: JCM14722_18800
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Entry
JCM14722_18800 CDS
T08636
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppor03400
]
JCM14722_18800
DNA repair and recombination proteins [BR:
ppor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
JCM14722_18800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
BDQ34338
LinkDB
All DBs
Position
1990378..1990788
Genome browser
AA seq
136 aa
AA seq
DB search
MSDVFDTQTRRMVMSRIGPKDTKPELRVRKLLHALGYRFRLHRKGLPGTPDIVLPRWKSV
IFVHGCFWHVHEGCKRATMPKTNVEFWKKKLKGNVVRDAKSIEQLRELGYRSLVIWECET
KNLDELADRLIAFLPR
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtcttcgacactcaaacgcggcgcatggtcatgagccgcatcggccccaag
gacaccaagccagaactccgtgtccgcaaactcctccacgccctcggctaccgtttccgc
ctgcatcgcaagggccttcccggcacccccgacatcgtcctgccccgttggaagtccgtg
atcttcgttcacggctgcttttggcatgtccatgaggggtgcaagcgggcgaccatgccc
aagaccaatgtcgaattctggaagaagaagctcaagggcaatgtggtccgagacgccaag
agcattgaacaactccgggagcttgggtacaggagtcttgtaatctgggaatgcgagacc
aaaaacctcgacgaactggcggacaggcttatagccttcctgccgcgataa
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