Pseudodesulfovibrio portus: JCM14722_19580
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Entry
JCM14722_19580 CDS
T08636
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppor03021
]
JCM14722_19580
Transcription machinery [BR:
ppor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JCM14722_19580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
KORA
HTH_11
GntR
HTH_28
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BDQ34416
LinkDB
All DBs
Position
complement(2074970..2075977)
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AA seq
335 aa
AA seq
DB search
MIEPEIVEPGEDDLDLDGPNAIPVNPPAKAGSAEEKLPALNLTPSSKAVQVRDPLQLYLK
EIARFPMLEPEEEYELAKRVQEENDQDAAFKIISSHLRLVVKIAMDFQRRWMQNGLDLIQ
EGNVGLLKAVTKFDPEKGIKFSYYAAFWIKAYILKYIMDNWRMVKIGTTQTQRKLFYNLN
KERQRLQTLGFDPSTEVLSERLGVSEAEIEEMDQRLSKNDMSLNAPLGDDSDTTKMDFLP
SLAPGVEESIANGQIVDLLLDNIREIRPTLNEKEEAILDRRLLSEDPVTLREIGEEFGVT
RERVRQIEARLLAKIREHMAGRVKGFSKEWVLEHD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaccggaaatcgttgaacccggcgaagatgatctcgaccttgacgggcccaac
gcgattcccgtcaatcccccggccaaggccggcagtgcggaggagaagctcccggcgctc
aacctcaccccctcttccaaggcggtgcaggtccgcgacccgctgcagctctacctcaag
gagatcgcccggttccccatgctggagccggaagaggaatacgaactggccaagcgggtt
caggaggagaacgaccaggacgcggccttcaagatcatatcctcccacctgcgcctggtg
gtcaagatcgccatggactttcagcgtcgctggatgcagaacggactggacctgatccag
gagggcaacgtcgggctgctcaaggccgtgaccaagttcgacccggaaaaggggatcaag
ttctcctattacgcggccttctggatcaaggcgtacatcctgaagtacatcatggacaac
tggcgcatggtcaagatcgggaccacccagacccagcgcaagctcttttacaacctgaac
aaggaaaggcagcggctccagaccctgggcttcgacccgtccaccgaggtcctgagcgag
cggctcggggtgtccgaggccgagatcgaggagatggaccagcggctttccaagaacgac
atgtccctgaacgcgcccctgggcgacgactccgacaccaccaagatggatttcctgccg
tctctggcccctggcgtggaggagtccatcgccaacggccagatcgtggacctgctgctc
gacaatatcagggagattcggcccaccctgaacgagaaggaagaggccatcctcgaccgg
cggctcctgtccgaggaccccgtgaccctgcgcgagatcggcgaggaattcggggtgacc
agggagcgggtgcgccagatcgaggcccggctgctggccaagattcgcgagcacatggcc
gggcgggtcaagggcttctccaaggaatgggtcctggaacacgattag
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