Pseudodesulfovibrio portus: JCM14722_20230
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Entry
JCM14722_20230 CDS
T08636
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor00550
Peptidoglycan biosynthesis
ppor01100
Metabolic pathways
ppor01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JCM14722_20230
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JCM14722_20230
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppor01011
]
JCM14722_20230
Enzymes [BR:
ppor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JCM14722_20230
Peptidoglycan biosynthesis and degradation proteins [BR:
ppor01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JCM14722_20230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BDQ34481
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All DBs
Position
complement(2134130..2136025)
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AA seq
631 aa
AA seq
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MPDLYNETDQQPPRSGLLLLQALILGLFCLFSIRLWYLQIHRGEDYARKAKENQLRQESI
FSPRGLIRDRNGDLLAVNEPAYALGIVREDCPDIDKAMHQIAAWTGRDFFELKAFYDKNK
KRVKPFEPLILIPDLTFGQLALLETNKLRWPGLEIQFRPRRLYRYGTLLAHVLGYVAEAN
EEELEKNPGLALGDYVGKQGIEFMLEDRMRGAKGLAQYEVDVNGRRLQERILKHPRAGHE
ISLSLDLGLQQLAMDWLDEEAGGVAVMDADTGQLWALATAPSYDSNDFSSGLTPDQWAKL
RDDPLHPMQNRVIQSVYPPGSVFKHVVASAGLHYGMIDPQETVLCTGSTRLGRRVFRCWR
KGGHGNVNLERALIESCDVYFYKMGKKLTVDRMAEFANAVGFGHKTGIRLPHEKAGNIPT
REWKRKRFGESWQGGDNLNMAIGQGYTLVTPLQVARFFAGILNGGKLLKPLLLKDAKTEV
QAEVPLTPDQLERIKRALVQTVVDDHGTCRRLRTKDVTVGGKTGTAQVVRLTDELKELKD
HEIPYRFRDHAWMAAIAEKDGKRFAIAALVEHGLHGGSGAGPVVKAVIDYLFKGEIRLKP
EERKAEARRVRALSLKSQKAAAQKKEKPDAD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccagacctctataacgaaacagaccagcagcccccgcgctcgggcctgctcctgctc
caggcgctcatcctgggactcttctgcctgttctccatccgcctctggtacctgcagatt
caccggggcgaggactacgcccgcaaggccaaggagaaccagctcaggcaggaatcgatc
ttttccccgcgcggcctgatccgcgaccgcaacggcgacctgctggccgtgaacgagccc
gcctacgccctgggcatcgtgcgcgaggactgcccggacatcgacaaggccatgcaccag
atcgcggcctggaccggacgcgacttcttcgagctcaaggcgttctacgacaagaacaag
aaacgggtgaaaccgttcgagccgctgatcctcatcccggacctgaccttcggccagctc
gccctgctcgagaccaacaagctccgctggcccggcctggaaatccagttccggccccgc
cgactctacaggtacggcacgctgctggcccacgttctcggctacgtggccgaggccaac
gaggaggagctggagaagaacccgggcctggccctgggcgactacgtgggcaagcagggc
atcgagttcatgcttgaagaccgcatgcgcggggccaaggggctggcccagtacgaggtg
gacgtcaacggccgtcggctccaggagcgcatcctcaagcacccgcgcgccgggcacgag
atatccctgtccctggacctggggttgcagcagctggccatggactggctcgacgaggaa
gcgggcggcgtggccgtcatggacgccgacaccggccagctctgggccctggcaacggct
ccttcctacgactccaacgacttttcctccgggctgacgcccgaccagtgggccaagctc
agggacgacccgctccaccccatgcagaaccgcgtcatccagtccgtgtacccgcccgga
tcggtgttcaaacacgtggtggcctcggccgggctgcactacggcatgatcgacccccag
gagaccgtgctctgcaccgggtccacccggctcgggcggcgggtcttccgctgctggcgc
aagggcggccacggcaacgtcaacctcgagcgcgccctgatcgaatcctgcgacgtctat
ttctataagatgggcaagaagctgaccgtggaccgcatggccgaattcgccaacgccgtg
ggcttcggccacaagaccggcatccggctgccccacgagaaggcgggcaacatcccgacc
cgtgaatggaagcgcaagcggttcggcgaatcctggcagggcggcgacaacctgaacatg
gccatcggccagggctacaccctggtcacgccgctccaggtggcccgcttcttcgccggg
atactgaacggcggcaagctgctcaagcccctcctgctcaaggacgccaaaaccgaggtc
caggccgaagtccccctgacgccggaccagctcgaacgcataaagcgcgccctggtccag
accgtggtcgacgaccacggcacctgccgcaggctgcgcaccaaagacgtgaccgtgggc
ggcaagaccggcacggcccaagtggtccggctcacggacgagctcaaggagctcaaggac
cacgaaatcccgtaccgcttccgcgaccacgcctggatggccgccatcgccgaaaaggac
ggcaaacggttcgccatcgccgccctggtggaacacggcctgcacggcggctcaggtgcg
ggccccgtggtcaaggcggtcatcgactacctgttcaagggtgaaatccggctcaagccc
gaggaacgaaaggccgaggcccggcgcgtgcgcgccctttccctgaaatcccagaaggcc
gccgcccaaaaaaaggagaagcccgatgccgattga
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