KEGG   Pseudodesulfovibrio portus: JCM14722_20500
Entry
JCM14722_20500    CDS       T08636                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
ppor  Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:ppor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppor03400]
    JCM14722_20500 (radA)
DNA repair and recombination proteins [BR:ppor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     JCM14722_20500 (radA)
SSDB
Motif
Pfam: ATPase Zn_ribbon_LapB AAA_25 AAA_16 AAA_22 DnaB_C AAA RecA AAA_24 NACHT IstB_IS21 ChlI nSTAND3 DUF7129 SLFN-g3_helicase ABC_tran RecX_HTH3 RsgA_GTPase Zn_ribbon_8 DUF7573
Other DBs
NCBI-ProteinID: BDQ34508
LinkDB
Position
2160481..2161878
AA seq 465 aa
MCRLLRDSRVGRGEPAGETWTKKGIVKTKETYRCAACGAQSPRWQGQCPSCKEWNTLEAV
TVARRDSKPVGAAAATDAPRPLEDLDSEHLDTRTSGMRELDELLGSGLVPGAAILLGGEP
GIGKSTLLLQLAGSQARLGSRAVYLSGEESLPQLKTRAERLGQLGPGLLAMATNRVEDAL
AVLESHEPPELLIVDSVQTLASNMAEGIPGSVSQVRAVASELVEKTKKTGTTLILVGHVT
KDGQIAGPKLLEHMVDTVLYLEGDRKHFSRILRVLKNRFGPSDELVVFTMKERGLEVVED
PATFFLGARDPSLSGTAMGLAVDGQRPFAVEVQALVTKSFLSIPRRTALGFDTNRLNLLL
AVLEKRLRLNLSGYDIYAKITGGLAYKDPGLDLAVVASVMSSFYDQPLPESAVFWGEIDL
NGQVRPVAAHDVRLKQAARLGHDPVCHSGTAATLADLQRILFGRN
NT seq 1398 nt   +upstreamnt  +downstreamnt
ttgtgcaggctgcttcgtgattcccgggtcggccggggcgaaccggcaggcgaaacctgg
accaagaaaggcatcgtgaaaaccaaggaaacatatcgttgcgccgcgtgcggcgcgcag
tcgccgcgctggcaggggcaatgcccgtcgtgcaaggaatggaacacgctggaggccgtg
accgtggccaggcgggactccaagcccgtgggcgcggcagcggccaccgacgcgccccgc
ccccttgaggacctggacagcgagcacctggacacccggacctcgggcatgcgcgagctg
gatgaactgctcggctccggcctggtcccgggcgcggccatcctgctcggcggcgaaccg
ggcatcggcaagtccacgctgctgctgcagctggcgggcagccaggcgcggctcggcagc
agggccgtctacctgtcgggcgaggaatccctgccccagctcaagaccagggcggagcgg
ctgggacagctcggaccgggcttgctggccatggccaccaacagggtggaggacgccctg
gccgtgctggagtcccacgagccgccggagctgctcatcgtggactcggtgcagaccctg
gcctcgaacatggccgagggcataccgggctcggtcagccaggtgcgcgccgtggcctcg
gagctggtggagaagaccaagaagaccggcaccaccctgatcctcgtgggccacgtgacc
aaggacggccagatcgccgggcccaagctcctggagcacatggtggacacggtcctgtac
ctggagggcgaccgcaagcatttttcccgcatcctgcgcgtgctcaagaaccggttcggc
cccagcgacgagctggtggtcttcaccatgaaggagcgcgggctggaagtggtggaggac
ccggccacctttttcctgggcgcgcgggacccgtccctgtcgggcacggccatgggactg
gccgtggacgggcagcgcccctttgccgtggaggtccaggccctggtcaccaagtccttt
ttgtccattccccggcgcacggccctcgggttcgacaccaaccggctcaacctgctcctg
gccgtgctcgaaaagcggctgcggctgaacctgagcgggtacgacatctacgccaagatc
acgggcggcctggcctacaaggaccccggcctggacctggccgtggtggcgtccgtcatg
tcgtccttctatgaccagcccctgccggaatcggcggtgttctggggcgagatcgacctc
aacgggcaggtgcgcccggtggccgcccacgacgtgcgcctcaagcaggcggcccggttg
ggccacgacccggtctgccattccgggaccgcggccaccctggcggacctgcagcgtatt
ctgttcggacgcaattga

DBGET integrated database retrieval system