KEGG   Pseudodesulfovibrio portus: JCM14722_21400
Entry
JCM14722_21400    CDS       T08636                                 
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
ppor  Pseudodesulfovibrio portus
Pathway
ppor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    JCM14722_21400 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppor03400]
    JCM14722_21400 (uvrA)
DNA repair and recombination proteins [BR:ppor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JCM14722_21400 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      JCM14722_21400 (uvrA)
SSDB
Motif
Pfam: UvrA_inter ABC_tran SMC_N UvrA_DNA-bind AAA_29 DnaJ_CXXCXGXG nSTAND1 AAA_16 AAA_25 AAA_23 AAA_33 AAA_21 RsgA_GTPase AAA_22 NACHT nSTAND3 AAA_18 BCA_ABC_TP_C ATPase_2 YhfH
Other DBs
NCBI-ProteinID: BDQ34598
LinkDB
Position
complement(2253107..2255869)
AA seq 920 aa
MTKATEHKSIHIEGARHHNLKDLTLDIPRDSLVVVCGPSGSGKSTLAFDIVYAEGQRRYV
ESLSAYARQFLPQMDKPDVDKVEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFYAR
LGKFYCPECGQPIEAQTTDQIVDTILALPEGTKFMLLAPLVEHQKGTHKDLFKKLKKDGF
VRVRVGGELYSLDEVPELEKNKKHTIDLVVDRLVLKDGIKKRLADSVELALEKGDERLIV
SVVGGDSPGDTAMSTLSTCPACRISMPRLTPQLFSFNSPQGACPTCNGIGTVEYFEPDLI
APNKGLSLNDGGIIPWKSAYRQEQYGPKLRALGKLHGFNENTPLSDFSPEAWDDLFYGNP
KVNWQGVVPILEYGQQMSGVWDHWTARFQQSRPCPDCDGARLKPEALAVRVAGKNMFEFA
SMSIQRALDWLQDLDFSGHDTLISEPLLKELTHRLGFMVNVGLEYLSLGRNMATLSGGEA
QRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNQRLLDTLRSLQSRGNTVLVVEHDEPTIR
EADHVIEIGPSSGWLGGEIVYQGDVDGLLEADTLTGKYLRGDMFIEPPATRRKDTGRIRL
LDVQTNNLKNLDVDIPLGVMTCVTGVSGSGKSSLVMDSMYKHLLLHMGQKANNPGKIGGI
DGLDKIEKVISIDQTPIGRTPRSNPATYTKIFDEIRKIFAGAKEARKRGYKPGRFSFNVK
GGRCEACKGDGQIRVEMHFLPDVYVTCETCKGKRYNAQTLEVEYRGKTIADVLDMTVRQA
REFFANHPALMRKLDVLAQVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGALYIL
DEPTTGLHMHEVGKLIHVLHALVDKNATVIVIEHNTDVIKASDHVIDLGPGGGEHGGQIV
ASGTPEEILANPDSATGQFL
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgaccaaagccaccgaacacaaatccatccatatagaaggtgcccggcaccacaatctc
aaggacctgaccctggacatcccccgcgacagcctggtggtcgtgtgcggcccgtccggg
tcgggcaagtccaccctggccttcgacatcgtctacgccgagggccagcgccgatacgtg
gagtcgctctcggcctacgcccgccagttcctgccccagatggacaagccggacgtggac
aaggtggaggggctgtccccggccatctcgctggaacagcagaccgccacccgcaacccg
cgctccaccgtgggcacggtgaccgaggtctacgacttcctgcgcgtgttctacgcccgg
ctgggcaagttctactgccccgagtgcggccagcccatcgaggcccagaccacggaccag
atcgtggacaccatcctggccctgcccgaaggcaccaagttcatgctcctggccccgctc
gtcgagcaccagaagggcacgcacaaggacctgttcaagaagctcaagaaggacggcttc
gtgcgcgtgcgcgtgggcggcgagctgtactccctggacgaggtgcccgagctggagaag
aacaagaagcacaccatcgacctggtggtggaccgcctggtgctcaaggatggcatcaag
aagcggctggccgactccgtggagctggccctggaaaagggcgacgagcggctcatcgtg
tccgtggtgggcggcgacagccccggcgacaccgccatgtccaccctgtccacctgcccc
gcctgccgcatctccatgccgcgtctcaccccgcagctcttctccttcaactcgccccag
ggggcctgcccgacctgcaacggcatcggcaccgttgaatatttcgagcccgacctgatc
gcgcccaacaagggcctctccctgaacgacggcggcatcatcccgtggaaatccgcctac
cgccaggagcagtacgggcccaagctcagggcgctgggcaagctgcacgggttcaacgag
aacaccccgctgtccgacttctcgcccgaggcctgggacgacctgttctacggcaatccc
aaggtcaactggcagggcgtggtgcccatcctggaatacggccagcagatgtccggcgtc
tgggatcactggaccgcccgcttccagcagtcccgcccctgcccggactgcgatggcgcg
cgcctcaagcccgaggccctggccgtgcgcgtggccgggaaaaacatgttcgagttcgcg
tccatgtccatccagcgggcgctcgactggctccaagacctcgatttcagcgggcacgac
accctcatctccgagccgctcctgaaggagctcacccaccgcctcgggttcatggtcaac
gtggggttggaatacctctcccttggccggaacatggccaccctgtccggcggcgaggcc
cagcgcatccggctcgcctcccaactcggctccggccttgtcggcgtgacctacgtgctg
gacgagccgtccatcgggctgcacccccgcgacaaccagcggctcctggacaccctgcgc
tcgctccagtcgcgcggcaacaccgtgctggtggtcgagcacgacgagcccaccatccgc
gaggcggaccacgtcatcgagatcggcccctcatcgggctggctcggcggcgagatcgtc
taccagggcgacgtggacggcctgctcgaggcggataccctgaccggcaagtacctgcgc
ggcgacatgttcatcgagccgcccgcgacccgacgcaaagacacgggccgaatccgactc
ctcgacgtccagaccaacaacctcaagaatctcgacgtggacatccccctcggcgtcatg
acctgcgtcaccggcgtgtccggatcgggcaagtcgtccctggtcatggactccatgtac
aagcacctgctcctgcacatggggcagaaggcaaacaatcccggcaagatcggcggcatc
gacggcctggacaagatagagaaggtcatctccatcgaccagacgcccatcggccgtacc
ccgcgctccaacccggccacctacaccaagattttcgacgaaatccgcaagatcttcgcc
ggagccaaggaggcccgcaagcgcggctacaagcccggccggttctccttcaacgtcaag
ggcggccgctgcgaggcgtgcaagggcgacggccagatcagggtcgagatgcacttcctg
cccgacgtctacgtcacctgcgagacctgcaagggcaagcggtacaacgcccagaccctg
gaggtcgaatacaggggcaagaccatcgccgacgtgctggacatgaccgtgcgccaggcg
cgcgagttcttcgccaaccatcccgcgctcatgcgcaagctcgacgtgctcgcccaggtc
ggcctggaatacctgcgcctgggccagcccgccaccaccctgtccggcggcgaggcccaa
cgcatcaaaatctcccgcgaactcggcaagcgcagcctgcccggcgcgctctacatcctg
gacgagcccaccaccggcctgcacatgcacgaggtcggcaaactcatccacgtgctccac
gccctggtggacaaaaacgccacggtcatcgtcatcgagcacaacaccgacgtcatcaag
gcctcggaccacgtcatcgacctcggccccggcggcggcgaacacggcggccagatagtc
gcctccggcacgcccgaggaaatcctcgccaaccccgacagcgccaccggacagttccta
tag

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