Pseudodesulfovibrio portus: JCM14722_21890
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Entry
JCM14722_21890 CDS
T08636
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JCM14722_21890 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppor03019
]
JCM14722_21890 (rnc)
03009 Ribosome biogenesis [BR:
ppor03009
]
JCM14722_21890 (rnc)
03036 Chromosome and associated proteins [BR:
ppor03036
]
JCM14722_21890 (rnc)
Enzymes [BR:
ppor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JCM14722_21890 (rnc)
Messenger RNA biogenesis [BR:
ppor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JCM14722_21890 (rnc)
Ribosome biogenesis [BR:
ppor03009
]
Eukaryotic type
90S particles
RNase
JCM14722_21890 (rnc)
Prokaryotic type
rRNA processing factors
JCM14722_21890 (rnc)
Chromosome and associated proteins [BR:
ppor03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JCM14722_21890 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BDQ34647
UniProt:
A0ABM8AT67
LinkDB
All DBs
Position
2308157..2308840
Genome browser
AA seq
227 aa
AA seq
DB search
MDSAELQISIHHRFGQVKFLETALTHSSFANEQDGFDDNERLEFLGDAVLELCISEEGFR
RFPSAAEGQLTRIRSQLVKERSLAAIARSLKLDRYIRLGRGEELQGGRERDALLADAFEA
VMGAVFLDGGFEAAKGSILAIFEDLWPLETMLPEAKDYKSRLQEVAQERFRDRPIYVLAG
TSGPEHEKIFKVDVTLPEGEVFRGTSTSVKRAEQESAKIALDYLCDE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggattccgctgaactacagatttctatccaccatcggtttgggcaagtcaagttcctg
gagaccgcgctcacccattcttcgttcgccaacgaacaggacgggtttgacgacaacgag
cgtttggagttcctcggggacgccgtgcttgagttgtgcatctcggaagagggattccgc
cggtttccttctgccgcagaagggcagctcacgcgcatccgttcccagctggtcaaggag
cggtccctggccgccattgcccggtcgctgaagctggatcgatacatccggctggggcgc
ggcgaagagctgcagggcggaagggaacgggatgcgctcctggcggacgccttcgaagcg
gtcatgggggccgtgttcctggacggcgggttcgaggcagccaaggggtccatcctggcc
atcttcgaggacctctggccgctggagaccatgctgcccgaggccaaggactacaagagc
cggctgcaggaagtggcccaggagcggttccgggacaggccgatctatgtcctggccggg
acgagcgggccggagcacgagaagatattcaaggtggacgtgaccctgcccgagggcgag
gtcttccgcggcaccagcaccagcgtgaagcgggcggaacaggaatccgccaagatcgcg
ctggactacctctgcgacgaataa
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