Pseudodesulfovibrio portus: JCM14722_26570
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Entry
JCM14722_26570 CDS
T08636
Symbol
groL_2
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JCM14722_26570 (groL_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppor03019
]
JCM14722_26570 (groL_2)
03110 Chaperones and folding catalysts [BR:
ppor03110
]
JCM14722_26570 (groL_2)
03029 Mitochondrial biogenesis [BR:
ppor03029
]
JCM14722_26570 (groL_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppor04147
]
JCM14722_26570 (groL_2)
Enzymes [BR:
ppor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JCM14722_26570 (groL_2)
Messenger RNA biogenesis [BR:
ppor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JCM14722_26570 (groL_2)
Chaperones and folding catalysts [BR:
ppor03110
]
Heat shock proteins
HSP60 / Chaperonin
JCM14722_26570 (groL_2)
Mitochondrial biogenesis [BR:
ppor03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JCM14722_26570 (groL_2)
Exosome [BR:
ppor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JCM14722_26570 (groL_2)
Exosomal proteins of other body fluids (saliva and urine)
JCM14722_26570 (groL_2)
Exosomal proteins of breast cancer cells
JCM14722_26570 (groL_2)
Exosomal proteins of colorectal cancer cells
JCM14722_26570 (groL_2)
Exosomal proteins of bladder cancer cells
JCM14722_26570 (groL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cob_adeno_trans
divDNAB
FtsA
Motif
Other DBs
NCBI-ProteinID:
BDQ35115
LinkDB
All DBs
Position
complement(2841448..2843100)
Genome browser
AA seq
550 aa
AA seq
DB search
MAKEILFDAKAREKLKAGVDKLANAVKVTLGPKGRNVVMEKSFGSPVITKDGVSVAKEIE
LEDKFENMGAQMVKEVASKTSDVAGDGTTTATILAQAIFTEGVKLVAAGRSPMAIKRGID
KAVEAIVAELEKVAKPTRDQKEIAQVGTISANNDATIGNIIAEAMNKVGKEGVITVEEAK
GLDTTLDVVEGMQFDRGYLSPYFVTNTERMTCEMEEPLILINEKKISNMKELLPVLEQCA
KMSKPLLIVAEDIEGEALATLVVNKLRGTLNVVAVKAPGFGERRKAMLKDIATLTGGTVV
SEDLGIKIEGLTVNDLGSAKRIVIDKENTVIVDGAGKADEIKARIAQIRAEIADSTSDYD
REKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVVLAR
CGKVIAKVKPADDDEQAGLNIIARAVEEPLRQIAGNAGLEGSIVVEKIKEGKGGFGYNAA
TDQYEDLIKAGVIDPKKVTRTALQNAASVAGLLLTTECAIADKPEPASAAPAMPGGMGGM
GGMGGMGGMY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatccttttcgacgccaaagcccgcgaaaagctgaaagcgggtgtcgac
aagctggccaacgccgtcaaagtcactctcggccccaagggccgcaacgtggtcatggag
aagtccttcggctcccccgtcatcaccaaggacggcgtgtccgtggccaaggaaatcgaa
ctggaagacaagttcgagaacatgggcgcacagatggtcaaggaagttgcctccaagact
tccgacgtcgccggtgacggcaccaccaccgccaccatcctggcccaggccatcttcacc
gaaggcgtgaagctcgtggctgccggtcgctcccccatggccatcaagcgcggcatcgac
aaggccgtcgaagccatcgtcgccgagctcgagaaggtggccaagcccacccgcgaccag
aaggaaatcgcccaggtcggcaccatctccgccaacaacgacgccaccatcggcaacatc
atcgccgaggccatgaacaaggtcggcaaggaaggcgtcatcaccgttgaagaggccaag
ggcctggacaccaccctggacgtcgtcgaaggcatgcagttcgaccgcggctacctctcc
ccctacttcgtgaccaacaccgagcgcatgacctgcgaaatggaagagccgctgatcctc
atcaacgaaaagaaaatctccaacatgaaagagctgctgcccgtcctcgagcagtgcgcc
aagatgtccaagccgctgctgatcgtggccgaggacatcgagggcgaagccctggccacc
ctggtggtcaacaagctgcgcggcaccctgaacgtggtcgccgtcaaggctcccggcttc
ggcgaacgccgcaaggccatgctgaaagacatcgccaccctgaccggcggcaccgttgtc
tccgaagacctcggcatcaagatcgaaggcctcaccgtcaacgatctcggctccgccaag
cgcatcgtcatcgacaaggaaaacaccgtcatcgtcgacggcgcaggcaaggccgacgag
atcaaggcccgcatcgcgcagatccgcgccgagatcgccgactccacctccgactacgac
cgcgagaagctccaggagcgtctggccaagatcgtgggcggcgtggccgtcatcaacgtc
ggtgccgccaccgagaccgagatgaaggaaaagaaagcccgcgtggaagacgccctgaac
gccacccgcgcagccgttgaagaaggcatcgtgcccggcggcggcgtggtcctggcccgc
tgcggcaaggtcatcgccaaggtcaagcccgctgacgacgacgagcaggccggtctgaac
atcatcgcccgcgccgtggaagagcccctgcgccagatcgccggcaacgccggtctcgaa
ggctccatcgtggtcgagaagatcaaggaaggcaaaggcggcttcggctacaacgccgcg
accgaccagtacgaagacctgatcaaggccggtgtcatcgatcccaagaaggtcacccgc
accgcgctgcagaacgccgcttccgtggccggtctgctgctgaccaccgagtgcgccatc
gccgacaagcccgagcctgcttccgcagctccggccatgcccggcggcatgggtggaatg
ggcggcatgggtggtatgggtggtatgtactag
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