Pseudodesulfovibrio portus: JCM14722_27680
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Entry
JCM14722_27680 CDS
T08636
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ppor03110
]
JCM14722_27680 (clpB)
Chaperones and folding catalysts [BR:
ppor03110
]
Heat shock proteins
HSP100
JCM14722_27680 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
nSTAND3
AAA_7
IstB_IS21
NACHT
AAA_24
AAA_18
ATPase_2
RNA_helicase
Roc
Zeta_toxin
NBD_SMAX1
T2SSE
ABC_tran
DNA_pol3_delta2
Snapin_Pallidin
DUF447_C
TIP49
LonB_AAA-LID
Motif
Other DBs
NCBI-ProteinID:
BDQ35226
UniProt:
A0ABM8AUP3
LinkDB
All DBs
Position
2952686..2955283
Genome browser
AA seq
865 aa
AA seq
DB search
MDPNTFTKKTQDAVSEAQNLAIRNGHQQIDCEHLMHALVAQDQGLAGQILRKLGIAPDAY
LGAVDAEIAKMPSVSGPGARPDQIMITPRMQKTLVAADDMRKRMKDEYVSVEHVFVALMD
EGSNTGVGRVNKQFSLDKNKVLGALEEVRGKQRVTSDNPEATYDSLKKYGRDLVEEARSG
KLDPVIGRDSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVNEDVPEGLKNK
TVFSLDMSALIAGAKYRGEFEERLKAVLKEVAESAGQIIMFIDEMHTIVGAGKTDGAMDA
GNILKPMLARGELHCIGATTIDEYRKYIEKDPALERRFQTVLVEEPNVEDTISILRGLRE
RFEVHHGVRIADSAIVEAAVLSNRYITDRQLPDKAIDLIDEAAALIRTEIDSQPYELDKA
NRQIMQLEIEREALKRESDKASRERLTGLEKKLAEIKEHQAALLAQWENEKSGIERLRSI
KEAIETTRREIDEAKRVHDYNRAAELEYGRLNTLEKDLEERNRELESGDTQRMVKEEVGP
DDVAQVIARWTGIPVSRLMEGEREKLLKLADVLHERVIGQDQAVQAVADAVLRARAGLKD
PSRPIGSFIFLGPTGVGKTELCKTLASALFDTEENMVRIDMSEYMEKHTVARLIGAPPGY
IGYDEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDFKNTI
VIMTSNLGAEYMLDGIDETGEFKVGVEDQVMEVLRRHFRPEFLNRVDETVLFRPLSREQL
IGIIDLLAAGLRSRLEDRKITLELTDKAKSFIAASAYDPSFGARPLHRYLQANLETPLAR
LLIGGELEEGATVTVDEKDGGLVFE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaatacctttacgaaaaagacgcaggacgccgtgtccgaggcccagaatctg
gccatccgaaacggtcaccagcagatagattgtgaacacctcatgcacgccctggtggcg
caggatcaggggctggcaggccagattctgcgaaagctgggcattgcgcccgacgcctat
ctgggcgccgtcgacgccgagatcgccaagatgccgagcgtgtccggtcccggggcgcgc
ccggaccagatcatgatcacgccgcgcatgcagaagacgttggttgcggccgacgacatg
cgcaagcgcatgaaggacgagtacgtgtccgtggaacacgtcttcgtggccctcatggac
gagggatcgaacacgggcgtgggccgcgtgaacaagcagttttccctggacaagaacaag
gtcctcggggcgctggaagaggtgcgcggcaagcagcgcgtgacctcggacaatcccgag
gcgacctacgattcgctcaagaagtacggccgcgacctggtggaggaggcccgttcaggc
aagctcgatccggtcatcggccgcgactccgagattcgccgcgtcatccgcatcctgtcg
cggcgcaccaagaacaacccggtgctcatcggcgaggcgggcgtgggcaagacggccatc
gcggaagggctggcccagcgcatcgtcaatgaggacgtgcccgagggcctcaagaacaag
accgtgttttccctggacatgtccgcgctcatcgccggggccaagtaccgtggcgagttc
gaggaacggctcaaggccgtgctcaaggaggtggccgagtccgccgggcagatcatcatg
ttcatcgacgagatgcacaccatcgtgggcgcgggcaagaccgacggggccatggacgct
ggcaacatcctcaagcccatgctggcgcgcggcgagctgcactgcatcggcgcgaccacc
atcgacgaataccgcaaatacatcgagaaggacccggcgttggagcgccgtttccagacg
gtgctggtggaagagcccaacgtggaggacaccatttccatcctgcgggggctgcgggag
cggttcgaggtgcaccacggcgtgcgcatcgcggacagtgccatcgtggaggccgccgtg
ctctccaaccggtacatcaccgaccggcagctcccggacaaggccatcgacctcatcgac
gaggccgcagccctgatccgcaccgagatcgattcccagccctatgagctggacaaggcc
aatcgccagatcatgcagctcgagatcgagcgcgaggccctcaagcgcgagtcggacaag
gcgtcccgcgagcggctcacggggttggagaagaagctggcggagatcaaggaacatcag
gctgcgctgctcgcccagtgggagaacgaaaagtccggcatcgagcggcttcgctccatc
aaggaggccatcgagaccacccggcgcgagatagacgaggccaagcgcgtgcacgactac
aaccgcgccgccgaactggaatacggtcgcctcaatacccttgaaaaggaccttgaagag
cgcaaccgggaactggaatccggggacacgcaacgcatggtcaaggaggaggtcggcccg
gacgacgtcgcccaggtcatcgccaggtggaccggcatcccggtctccaggctcatggaa
ggggagcgcgagaagctgctcaagctggccgacgtgctccacgagcgggtcatcggccag
gaccaggccgtgcaggccgtggccgacgcggtgctgcgcgcccgtgcgggcctcaaggac
ccgagcaggcccatcggttcgttcatcttcctcggccccaccggcgtgggcaagaccgag
ctgtgcaagaccctggcttcggccctgttcgacaccgaggagaacatggtgcgcatcgac
atgtccgagtacatggagaagcataccgtggcccggctcatcggcgcgcctccgggttac
atcggctatgacgagggcggccagctcaccgaggccgtgcgccgcaagccgtattcggtc
atcctgttcgacgagatcgagaaggcgcaccacgacgtgttcaacgtcctgctgcagatt
ctcgacgacggcagattgaccgactctcacggccgtaccgttgatttcaagaacaccatc
gtcatcatgacctccaacctcggggccgagtacatgctcgacggcatcgacgagaccggg
gagttcaaggtgggcgtggaagatcaggtgatggaggtcctgcgccgccatttccggccc
gagttcctcaaccgggtggacgagaccgtgctcttcaggccgctgtcgagggaacagctc
atcggcatcatcgacctgctggcggcggggctgcgttcccggctggaagaccgcaagatc
acgctcgaactcactgacaaggccaagtccttcatcgcggcttccgcctacgacccgagc
ttcggggcgcgcccgctgcaccggtatctccaggccaacctggagaccccgctggcccgc
ctgctcatcggcggcgagctggaggagggggccacggtgaccgtggacgagaaggacggt
ggactggttttcgagtaa
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