Pseudodesulfovibrio portus: JCM14722_27900
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Entry
JCM14722_27900 CDS
T08636
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ppor
Pseudodesulfovibrio portus
Pathway
ppor03410
Base excision repair
ppor03430
Mismatch repair
ppor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCM14722_27900 (recJ)
03430 Mismatch repair
JCM14722_27900 (recJ)
03440 Homologous recombination
JCM14722_27900 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppor03400
]
JCM14722_27900 (recJ)
DNA repair and recombination proteins [BR:
ppor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JCM14722_27900 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JCM14722_27900 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JCM14722_27900 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BDQ35248
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All DBs
Position
2977212..2978921
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AA seq
569 aa
AA seq
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MPCIWKPRGEKTAPPDAARLADELEVSELIVEILANRGLSGAEEMDRFLSPLLRHMAPPS
EIPGLTDGAETLARGLAEGRTLCVWGDYDVDGITATALVKEFFALHGMDVRHHLPNRMEE
GYGLNVPHIEKLHSEGVNMLLTVDCGISDMEAVARARELGMIVVVSDHHLPGETLPDADA
VCDPRLGEEGPYADLAGVGVALLLMAALNPLLPGEPVDWRPLLDLVALGTIADVVSLTGQ
NRILVKNGLLLIKDARRPGMAALKVVSDYERQAELGAGQIGFNIAPRINAAGRMGDPEKA
LNLLLAKDFDTAMPIAEELNAINLERRRQEQEIADEAMQQAESMRQRAGLVLYGDHWHPG
IIGIVASRVVERFYRPTLLLCAPEASGGLLKGSGRSISEFNLYEGLQAVGDLLEGFGGHK
QAAGLTVSPDNLEALRRRFHDHVVETLGPEPLTPTLKLDHELGFANINNTLLKELELLQP
YGMGNPEPVFATKPVKVVEYATFGREREHVKIVLEDPETGTRLSGKAWRSAKTLTREAYG
RTMRFAFTPKIDRFRGIPKIDLRIRDWIF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
ttgccctgcatctggaaacctcgcggcgaaaagaccgcgccccctgacgccgcccgactg
gcggatgaactggaagtatccgaactgattgtggagatcctcgccaaccgaggcctgtcc
ggcgcggaggagatggaccgcttcctgagcccgctgctgcgccatatggccccgccgtcc
gagattcccggcctgaccgacggcgccgagaccctggcccgggggctggccgagggacgc
accctgtgcgtctggggcgactacgacgtggacggcatcacggccacggccctggtcaag
gagttcttcgccctgcacggcatggacgtccgtcaccatctgcccaatcgcatggaggag
gggtacggcctcaacgtcccgcatatcgaaaagctccattccgagggcgtgaacatgctg
ctcaccgtggactgcggcatctcggacatggaagccgtggcccgcgcccgcgaactgggc
atgatcgtggtggtctcggaccatcacctgcccggcgagacgctgccggacgccgacgcg
gtctgcgatccgcgtctcggcgaggagggcccctacgccgacctggccggggtgggcgtg
gccctgctgctcatggccgcgctgaacccgctgctgcccggcgagcccgtggattggcgg
cccctgctcgatctggtggccctgggcaccatcgccgacgtggtcagcctgaccggtcag
aaccgcattttggtcaagaacgggctcctgctcatcaaggacgcacggcgaccgggcatg
gccgccctcaaggtggtcagcgattacgagcgccaggcggaattgggggccgggcagatc
ggcttcaatatcgccccgcgcatcaacgcagccgggcgcatgggcgacccggaaaaggcg
ctcaatctgttgctggccaaggatttcgatacggccatgcccattgccgaggagctcaat
gccatcaacctggagcgtcgccgccaggagcaggagattgcggacgaggcgatgcagcag
gccgagtccatgcggcaaagggccgggctggtgctctacggcgatcactggcaccccggc
atcatcggcatcgtggcctcccgggtggtggagaggttctatcggcccacgctcctgctc
tgcgccccggaagcgtccggggggctgctcaaggggtcgggcaggtccatctccgagttc
aacctctatgaggggttgcaggccgtgggagacttgcttgaaggcttcggcgggcacaaa
caggcggccgggctgaccgtgtcgccggacaacctcgaagccctgcgccgccggtttcat
gaccacgtggtcgagaccctgggaccggagcccctcacgcccaccctcaagctcgaccac
gagctgggtttcgccaacatcaacaacaccctgctcaaggagctggaattgttgcagcct
tacggcatggggaacccggaacccgtgttcgccaccaagccggtcaaggtggtggaatac
gccaccttcggcagggagcgcgagcacgtgaagatcgtgctggaggacccggagaccggg
acgcggctgtccggcaaggcgtggcggtcggccaagaccctgacccgcgaggcttacggg
cggaccatgcgttttgccttcacccccaagatcgaccggtttcggggcatccccaagatc
gacctgcggattcgcgactggatattctaa
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