Pseudodesulfovibrio portus: JCM14722_29440
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Entry
JCM14722_29440 CDS
T08636
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppor
Pseudodesulfovibrio portus
Brite
KEGG Orthology (KO) [BR:
ppor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppor03016
]
JCM14722_29440 (truB)
Enzymes [BR:
ppor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JCM14722_29440 (truB)
Transfer RNA biogenesis [BR:
ppor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JCM14722_29440 (truB)
Prokaryotic type
JCM14722_29440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BDQ35402
UniProt:
A0ABN6RZA2
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All DBs
Position
complement(3126770..3127711)
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AA seq
313 aa
AA seq
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MGRKRNKRSPEQRDGLLILNKPSGPTSAACLNDIKHQLKQYKIGHGGTLDPMATGVLLVL
LGHGTKLAPYLSGGTKTYSGTFRLGITTDTLDIQGEVVKEAPVEATVDDVEREVYHWKEL
TEQEVPAYSAAKHEGKPLYALAREGKETPVKIKPIVISHVETLDVRMPEASFRVSCSAGT
YIRSLVHSLGIRMGCGATLTSLVRESSEPFTLAQAHDLEDVLENPETFPEKVIPLKDTLP
HWPRYRLTEPLAGLVTNGAWLPVNSQPGELLAGKLGDRAMLLDPEDEPLALVEAKLQDDK
PRWAILRGLWNRD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaagcgaaacaagcgcagcccggaacagcgtgacgggctgctcatcctgaac
aagccgtccggccccacatccgccgcctgcctgaacgacatcaagcatcagctcaagcag
tacaagatcggccacggcggcaccctcgatcccatggccacgggagtgctcctggtgctc
ctcggccacggcaccaaacttgcgccgtacctgtccggcggcaccaagacctattccggc
acgttccggctcggaatcactaccgatacccttgatattcaaggggaagtggtcaaagaa
gccccggtcgaggcgaccgttgacgatgtcgaacgcgaagtttatcattggaaagagttg
acagagcaggaagttcctgcctattccgctgccaaacacgagggcaagccgttgtacgcc
ctggcccgcgagggcaaggaaacaccggtcaaaatcaagcccattgttatttctcatgtg
gaaacgctggacgtgcggatgcccgaggcatccttcagggtcagttgctccgccggaacc
tacatacgatccctggtccacagcttggggattcgaatggggtgcggcgcgacactgacc
agcctggtccgggagtcgagcgagccgtttacgctcgcccaggctcacgacctcgaagac
gtcctggagaatccggaaacatttccggaaaaggtgatccccctaaaggacaccctgccc
cactggccgagatatcggctgaccgaaccgctggccggactcgttacgaacggggcctgg
ctgccggtcaattcccagcccggcgaactgctggccgggaaactcggcgaccgggccatg
ctgctcgatcccgaggacgagccgttggctctggtggaggcgaagctccaggacgacaag
cccagatgggccattcttcgcggtctctggaacagggactga
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