Papilio polytes (common Mormon): 106099575
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Entry
106099575 CDS
T07437
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot04382
Cornified envelope formation
ppot04512
ECM-receptor interaction
ppot04518
Integrin signaling
ppot04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106099575
04518 Integrin signaling
106099575
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106099575
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106099575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppot04147
]
106099575
00536 Glycosaminoglycan binding proteins [BR:
ppot00536
]
106099575
Exosome [BR:
ppot04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106099575
Glycosaminoglycan binding proteins [BR:
ppot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106099575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106099575
NCBI-ProteinID:
XP_013133595
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MSGPARARTKVLHLLVTVVLLLHWIPQEASAVVCNQTRCDCSGLKGDRGDPGPPGIIGLQ
GDYGDDGPEGRLGISGEIGDWGEKGDVGDKGERGADGLYGVRGYTGPQGPHGLEGIRGVA
GFDGCSGIDGVVGPPGRQGPPGDRGLPGPYGEKGSQGLAGEGGVNSRGAKGIMGDSGRPG
LPGPSGPMGWRGDSGLRGEEGDEGIMGIKGEPGYRGDSGDITVGPPGIKGDQGEIGEPGR
PATIVNIDTFKHNLSIIARGDKGDKGLKGMQGVKGLKGELGSRGQMGPYGINGPQGYKGD
QGEDGSRGKPGRRGKDGPPGPKGDKGAPGFAGLDGEDGLPGGPGEDGRTGTPGEQGPMGE
PGIFDESLNEPLLPGAQGPQGPVGYVGQQGAPGIDGLKGLPGVMGPPGYPGVKGFPGRVG
NPGISPKGEPGSDGRRGLPGLRGPPGFQGSIGTLGPKGFKGATVKGPDGEDALPGTDGIP
GPRGDRGEPGFMGQPGYPGRGVHGMGPQGDTGPPGPPGTVGDSGTPGRPGFPGLKGQRGD
DCPFCKSGLPGPKGQVGDSGFPGRRGYPGIQGLPGPRGQTGLPGTSGIPGAKGVKGNKGQ
SGMAGPQGLKGQKGWLIRPPLDLTLAERGLPGDVGFIGFPGLTGDGGWPGLGGDVGPTGV
KGRIGEFGNPGLPGQNGSRGRDGAPGWPGAPADIPMAFLRGDKGEAGIKGQHGEVGEPGQ
PGEVGESLENGINAKGERGPPGFPGIKGYRGRKGDRGDMGYDGFRGIPGDVGLPGRSIQG
PVGIQGFLGEKGEIGPSGEPGTRGQRGVTGFVGNKGHKGSRGEIGLATIFGERGIDGYRG
ERGDIGEPGYPGTPGRGGIMGIKGITGFSGDVGLDGPQGPPGRKGLPGIQIQGASGIPGR
PGFPGPRGQIGEPGLQGVNGIQGDVGPKGVKGEAGRVGIRGWTGQIGPVGFPGFPGVMGT
PGSQGEVGDRGEVGEQGSSGQPGTTGPPGLEGPKGYKGDYGLSGLPGLDGFNGVKGARGD
QGLPGIPGSRGENALLGMKGDVGDSGEYGEFGIPGIVGLKGLKGDDGTPGLSIGGYEGLK
GEQGEPGLQGIIGLNGTKGELGPNGVDGPPGETGDKGYQGQPGGPGRDGLIGFKGPMGRP
GLVGYTGAKGDLGMEGEPGIMGRPGIPGNEGWQGLIGVKGEMGFKGERGERGISTRLPAT
KGDIGDIGIDGIPGPKGSAGDNGNFGIIGIKGERGEIGMKGLTGEDGLPGVKGQIGDQGP
PGLPGLDGIDAERGQKGKAGFDGLPGWPGPMGQKGAPGEYGITGPDGESGPPGLSFQGPK
GFKGMDGFVGKQGEPGKPGPRGMEGIPGLQGKPGDVGEVGSSFSAKGVTGDQGWPGLKGY
QGIKGDRGDNGLDGYIGMQGSTGIKGERGEQGVQGITGLKGPRGMKGDKGKTIHQSEILP
GPIGDVGPRGFPGRRGADGPPGPNGRNGLFGIKGERGDVGFMGAVGLPGPQGPQGIKGFI
GYQGYEGRQGAPGVPGTPAPPPPIPKSRGFYFTVHSQTRMIPQCPAGTSPLWEGFSLIHI
VANAKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQREDYSFWLSTPEPMPIAMKPI
QARDVGSYISRCQVCETSTRTIAIHSQSSEVPTCPQGWDELWIGYSFLMHTAGADAAGQS
LISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTIDDNRMFSRPEQQTLKEDKITK
VSRCSVCMRRLPGPPAGVYQGGDVRSVPNEVVRQRPYNVPGRRPPYGPYGRRYSRRGQRQ
PVRVYKHVTT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtccggcgcgtgcgcgcaccaaagtgcttcaccttcttgtcaccgttgtcctg
ctgctgcactggatcccacaggaggcctcagccgtggtgtgcaatcagacacgatgcgac
tgttccggtctcaagggagaccgcggagaccccggcccccccggcattattggtcttcaa
ggtgactacggtgatgatggacccgagggccggctcggcatatccggcgaaataggcgac
tggggcgagaaaggagacgtcggtgacaaaggagaacggggtgcggacggcctctatgga
gtaagaggatatacaggacctcagggccctcatggattggaaggaattcgtggcgtggct
ggattcgatggatgtagtggtatcgacggagtggttggaccacctggaaggcaaggtcct
cccggtgacagagggctgcccggaccgtatggagaaaagggatcacaaggtttagctggc
gaaggaggagtcaactcaagaggtgcaaaaggaataatgggtgattctggcagacctggc
ttaccggggccttctggtcctatgggttggagaggagacagtggactccgcggtgaagaa
ggtgacgagggtataatgggtatcaaaggagaaccaggttacagaggagattcaggtgat
attaccgtaggaccaccgggaataaaaggagatcaaggggaaattggtgaacctggacga
ccagcaaccatagtcaatatagatacttttaaacacaatttaagcattatagccaggggc
gacaaaggtgataaaggacttaagggaatgcaaggtgtaaaaggactaaaaggagaatta
gggtcgaggggtcaaatgggtccatatggtataaatggtccacaaggttacaaaggagac
caaggtgaagatggttccagaggaaaacctggtcgtagaggaaaagatggacctccaggt
cctaagggtgacaaaggtgctcctggtttcgcaggattagacggagaagatggtttacct
ggtgggcccggagaagatggcaggaccggaactcctggagagcaaggacctatgggtgaa
cccggtatttttgatgaaagtttaaacgaacctctactaccaggtgctcagggaccgcag
ggtcctgtaggttatgtgggacaacagggagccccaggaattgatggattaaaaggattg
cctggagttatgggaccacctggttatccaggtgttaaaggatttcccggaagggtgggt
aatccaggaatctcacccaagggagaaccagggagtgacggacgcagaggcctacctgga
ctcagaggaccaccgggttttcaaggatcgattggtacattaggtcctaagggatttaaa
ggagccacagtcaaaggtcctgatggtgaagatgccttgccaggcacagacggtatccct
ggaccgagaggagatagaggtgaacctgggtttatgggtcaaccgggttatcctggccgt
ggggtgcacggaatgggaccacaaggagacaccggaccaccagggccaccaggtacagtt
ggtgattctggcactccaggacgaccagggtttccgggcttgaaagggcagagaggtgac
gattgtccattctgtaaatcaggtttacctggacctaaagggcaagtgggcgatagcggt
tttcctggacgaagaggatatccaggaattcaaggattgccagggccacgtggccaaact
ggtttgcccggtacttctggcataccgggtgccaagggtgtaaaaggaaataagggacaa
tctggtatggcgggacctcaaggactaaagggtcaaaaggggtggcttattcgtccacca
ctggatttgaccttagcagaacggggccttcctggagacgtaggcttcataggtttcccc
gggctgaccggagatggaggttggcctgggctcgggggggatgtgggcccaaccggtgtg
aagggaagaatcggcgaattcggcaaccccggtttgcccggacaaaacggatcaagagga
cgagatggtgctcccggctggcccggtgcgcccgctgacataccaatggcttttctgcgt
ggagacaaaggagaagctggaattaaaggtcaacatggtgaggttggagaacctggtcag
ccaggagaggttggagaatccctagaaaacggcattaacgctaaaggggaacgaggacct
ccaggatttcctgggataaaaggttatcgcggcagaaaaggtgaccgtggcgatatggga
tacgacggctttaggggtattcccggtgacgtggggcttcccggcagatctatacaaggc
cctgttggaatacagggatttcttggcgaaaaaggagaaataggtcctagtggggaaccc
ggaacacgtggtcaacgtggagtcacaggatttgttggtaataaagggcataaaggatca
aggggcgaaattggccttgctacaatttttggtgagagaggtatagatggctaccgcgga
gagcgaggtgatatcggtgaaccaggataccccggcacgccaggtcgcggcggtatcatg
ggaattaagggcatcactggattttctggcgacgtgggtctggatggaccacaaggacca
ccaggacgaaaaggactacctggtatacaaatacagggtgcttctggaattcctggacgc
ccaggattccctgggcccaggggacaaattggtgaacctggtttgcaaggagtaaatggt
atacaaggtgatgtcggacctaaaggcgtaaaaggagaagctggtcgcgttggcattcgt
ggatggactggccaaataggaccagttggctttcctggcttcccaggagttatgggaacc
cctggatcccaaggtgaagttggagacagaggtgaggttggagaacaaggatcttcaggg
caacctggaacaacgggtcccccgggacttgagggacctaaaggatataaaggtgactac
ggtttaagcggactacctggattagatggttttaatggagtcaaaggagcccgaggagat
caaggattacccggcataccgggttcgcgcggtgaaaatgcattattaggaatgaagggt
gacgttggagattcaggggagtatggagaatttggaatacctggtattgttggactcaaa
gggttaaaaggagatgatggaacccctgggttatctattgggggatatgaaggtttgaaa
ggagagcaaggggagcctggactacaaggcatcattggtcttaatggaaccaaaggcgaa
ttgggccccaacggtgtcgatggccctccgggtgaaacaggtgacaaaggttaccagggc
caaccaggaggcccaggaagagatggattaattggtttcaagggaccaatgggtaggccg
ggtcttgttggctataccggagcaaaaggtgacctagggatggaaggggagccgggcatt
atgggtagaccgggcattccaggaaatgaaggctggcaaggtctaataggcgtcaagggt
gaaatgggtttcaagggagaacgtggagaaaggggaattagtacccgtttaccggctaca
aaaggtgatattggagatattggaattgatggaatacctggaccaaaaggatcggcaggg
gacaacggtaattttggaatcataggcattaagggagaacgtggtgaaattggtatgaag
ggattaactggtgaagatgggctaccaggtgtaaagggtcagataggagatcaaggccca
ccaggattgcctggattagacggaattgacgctgaaaggggtcaaaaaggtaaagctgga
tttgatgggcttcctggatggcctgggccaatgggtcaaaaaggtgctcctggtgaatat
ggtattaccggtcctgatggtgaaagtggaccaccgggattaagtttccagggcccgaaa
ggttttaaaggtatggatgggtttgttggcaaacaaggagaacccggaaagcctggacct
agaggaatggaaggaattcctggattgcaaggaaaaccaggagatgtaggtgaagtagga
tcctcgtttagtgctaagggagttacaggcgatcaaggatggcctgggttaaagggctat
caaggcattaagggtgataggggtgataatggattggacggctatatagggatgcaaggc
tctacgggtattaaaggagaaagaggagagcaaggcgtgcagggcatcacaggtcttaaa
ggacctagaggaatgaaaggtgataaaggaaaaactattcatcaatcagaaatattaccc
ggtcctataggcgatgttggtcctcgtggatttcctggacgtcgcggagcggacggtccg
ccgggtccaaatggacgtaatggcttgttcggcattaaaggcgaaagaggagacgtcggt
ttcatgggcgcagtaggacttccaggacctcaaggccctcaaggaataaaaggatttata
ggttatcaaggttatgaaggtagacaaggagcgccaggggttccgggtacacctgcgcca
ccaccgccgataccgaagtcgcgaggtttttatttcacggtacattcacaaaccagaatg
attccacaatgtccagcgggaacatcacctctctgggaaggattctcccttatacatata
gttgcgaatgcaaaagctcacggtcaagatttaggagcacctgggagttgtctacgtaag
ttctcaaccatgccatacatgttttgcaatcttaacaatgtttgtgactttgctcaacgc
gaggattacagtttttggctgtccacgccagagccaatgccgatagctatgaagcctatt
caagctagagatgtcggttcatacatatcgaggtgtcaagtgtgtgagacatcaacacga
acaatcgccatacatagccaaagtagtgaagtgccaacgtgtccacagggttgggacgaa
ttatggattggttacagctttttaatgcacacggcaggcgcagacgcagctggacaaagt
ttaatatctcctgggtcctgtctccgcgagttccgtacgcggccatttattgaatgtaac
ggtctcggtcgctgcaattacttcgcaaccgccgtctcctactggttatcgaccatcgac
gataacagaatgttctcacggcctgaacaacaaacgcttaaggaagataaaatcactaaa
gttagcagatgttcggtgtgcatgaggcggctcccgggcccgccggccggcgtctaccag
ggaggcgacgtgcgctcggtgcccaacgaagtggtgcgccagcggccgtacaacgtcccg
ggccgcagaccgccttacgggccctacggacgcagatactccaggcgcggccagcgacag
cccgtcagagtctacaagcacgtcactacatag
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integrated database retrieval system