Papilio polytes (common Mormon): 106101127
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Entry
106101127 CDS
T07437
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03008
Ribosome biogenesis in eukaryotes
ppot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106101127
09123 Folding, sorting and degradation
03018 RNA degradation
106101127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppot03021
]
106101127
03019 Messenger RNA biogenesis [BR:
ppot03019
]
106101127
03009 Ribosome biogenesis [BR:
ppot03009
]
106101127
03016 Transfer RNA biogenesis [BR:
ppot03016
]
106101127
Transcription machinery [BR:
ppot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106101127
Messenger RNA biogenesis [BR:
ppot03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
106101127
Ribosome biogenesis [BR:
ppot03009
]
Eukaryotic type
Pre-60S particles
RNases
106101127
Transfer RNA biogenesis [BR:
ppot03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
106101127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
106101127
NCBI-ProteinID:
XP_013135705
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MGVPAFFRWLSRKYSSVIVECVEERPTDVDGQLIHIDSSLPNPNGVEFDNLYLDMNGIIH
PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKEIQEKIEEVARVRSELLAKGAYLPPEKPKEAHFDSNCITPGTPFMDRLSKCLHYYIH
DRLNNDPGWKSIKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPDASVVRSDPAFGTQDNFI
FVRLSVLREYLEKELQMPNLPFPYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR
LVNLYKKCVYKTKGWVTDSGDVNLERVQVIMDELGRVEDEIFKRRHNNELVFRARDKARK
KQQQVNFKLLEKTQFAPMSLSAAAKPVQNARQEAANIRIAGMNAVSEQEGSERRGRKRSA
AEAQAEGGEEAEEDEDKHDEVRLWEDGFKERYYESKFEVSRENMEFRYRVALQYVRGLCW
VLRYYYQGCASWKWYFPYHYAPFASDFVNVCGLSTKFERGTQPFRPLEQLMGVFPAASSS
HVPQPWAKLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALEPYYKE
LSQAEIQRNIRGHDRLYVSPAHPSYGALVALYAEGGARPQAPDDTRHPYRSQGVRGDVLL
SGDNVSVGGQLPSPVVGLSPVLGNRVVCVRFEDPQYPEEFIFPARRLQGATEPPRVLKPG
DLTDQQNRNWRPHIGMVRSHTVANLEMAGHRMLGHHLPRERNYGSVPPPQHNQGYGQHQR
SHSFGPQRSGYTSNYNQGQNRGYQGQGYRQNYQGNNHHGNNYHSNQGYSNNQGYTSNQGY
SSNQGYSSNQGYTTQGYNSSQSNGRGYHGQGQKYSRGPQSERRPTGQGGRQGGSWR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcgttttttcgctggctcagtcggaaatactcaagcgttattgtggaa
tgcgttgaagaaaggccaactgatgttgatggtcaattgatacatatagattcatctttg
ccaaacccaaatggagtggagtttgataacttgtatttggatatgaacggtataatacac
ccatgtacgcatccggaagacaagccagcgcctaaagatgaggatgagatgatggtggct
atttttgaatgcattgatcgtttatttcgtatcgtgaggcccaggaaactactgtacatg
gcaattgatggagtggccccacgagctaagatgaaccagcaaagatcaagaagatttagg
gcatctaaggagattcaggagaagatagaggaagtagcccgtgtacggtcagagttactg
gctaaaggagcatatttgcctccagagaagcccaaagaggctcactttgactcaaattgt
atcactcctggtacaccattcatggatagactgagcaaatgcttgcattattatatacat
gacagattaaacaatgaccctggatggaagagtatcaaagtgatcctgtcagatgctaat
gttccaggagagggagagcataagatcatggactacataagacgtcaaagagctcagccg
gaccatgaccctaatacacaacatgtgttatgcggtgctgatgctgacctgataatgttg
ggtctggcaacacatgagccaaacttcaccattatacgagaagaattcaagccaaataaa
cctcgcccttgtgatgtctgtgggcagctcggtcatgagatgaaggagtgcacagggaca
actccggatgcttcagtggtacgctcagacccagcattcggtactcaggataacttcata
tttgtcaggttgagtgtgctgcgggagtatttagagaaggaactccaaatgccaaacctg
ccgttcccatatgattttgagagagcattagacgattgggtgttcatgtgctttttcgtt
ggcaatgacttcttaccccatttacccagtctggagatacgagagggtgcggtggataga
ttggtcaatttgtacaagaaatgtgtttacaagactaagggctgggtgacggactccggt
gacgtgaacctggagcgtgtgcaagtgataatggatgagctgggccgcgtcgaggatgag
atcttcaagcggcgtcataacaacgagctggtgttccgcgcgagggacaaggcgcgcaag
aagcagcagcaggtcaacttcaagttgctggagaagacgcagttcgcgccaatgtctctg
agtgctgcagcgaagccagtgcagaatgctagacaggaggctgctaacatccgtattgct
ggcatgaacgctgtctctgagcaagaggggtctgagcgtcgcggacgtaagcggtccgcg
gcagaggcgcaggcggagggcggggaggaggcggaggaggacgaggacaagcacgacgag
gtgcggctttgggaggatggtttcaaggagcgctactacgagagcaagtttgaagtctcc
agagaaaatatggagttcaggtaccgcgtggcgctgcagtacgtgcgggggctgtgctgg
gtgctacgctactactaccagggatgcgcgagctggaagtggtacttcccctaccactac
gcacccttcgcgtcagacttcgtcaacgtctgcggactctctactaagtttgagaggggc
acgcaaccgttccgtccgctggagcagctgatgggcgtgttccccgcagccagctcctcg
catgtaccgcagccctgggcaaaactgatgagcgaccctttttcgcctatcatagacttc
tatcctacggacttcaagattgacttgaacggcaagaagtttgcatggcagggagtcgcg
ctgctgccatttgtggatgagaacagactcttcaaggccctagagccttactataaggaa
ctctcacaggctgaaatccagcgcaacatccgcggccacgaccggctgtacgtgtccccc
gcgcaccccagctacggcgcgctggtggcgctgtacgcagagggcggcgcgcggcctcaa
gcgcccgacgatacgcgccacccctaccgcagccagggggtgcgaggggacgtcctactc
agcggggacaacgtcagcgtcggcggccagctgccgtcccccgtggtgggtctgtctcct
gtgctgggcaaccgcgtggtctgcgtgaggttcgaggacccgcagtaccctgaggagttc
atcttccccgcgcgccggctgcagggcgccaccgagccccccagggtcctcaagccggga
gacctcactgatcagcagaacaggaactggagacctcacattggtatggttaggtcacac
acagtggctaacctagagatggcaggacatcgtatgctgggacaccatttgccaagggaa
cgtaattatggctccgtgcctcccccacagcacaaccagggttatggacaacatcaacga
tctcattcctttggaccgcaacgcagcgggtacacgtcaaattataaccaaggacagaac
cgtggataccagggacagggttacagacagaactaccagggtaacaatcaccatggtaat
aattaccatagcaatcagggttactctaacaaccagggttacactagcaaccagggttac
tccagcaaccagggttattctagcaaccaaggttacaccactcagggttacaatagttcc
cagtcgaatggcaggggttaccacggacaggggcagaagtattccagagggccgcagtcg
gaacgtcgtcctacaggacaaggtggtcggcaaggcgggtcatggcgttga
DBGET
integrated database retrieval system