KEGG   Papilio polytes (common Mormon): 106101127
Entry
106101127         CDS       T07437                                 
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ppot  Papilio polytes (common Mormon)
Pathway
ppot03008  Ribosome biogenesis in eukaryotes
ppot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppot00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106101127
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106101127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppot03021]
    106101127
   03019 Messenger RNA biogenesis [BR:ppot03019]
    106101127
   03009 Ribosome biogenesis [BR:ppot03009]
    106101127
   03016 Transfer RNA biogenesis [BR:ppot03016]
    106101127
Transcription machinery [BR:ppot03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     106101127
Messenger RNA biogenesis [BR:ppot03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     106101127
Ribosome biogenesis [BR:ppot03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    106101127
Transfer RNA biogenesis [BR:ppot03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    106101127
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC_4
Other DBs
NCBI-GeneID: 106101127
NCBI-ProteinID: XP_013135705
LinkDB
Position
Unknown
AA seq 956 aa
MGVPAFFRWLSRKYSSVIVECVEERPTDVDGQLIHIDSSLPNPNGVEFDNLYLDMNGIIH
PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKEIQEKIEEVARVRSELLAKGAYLPPEKPKEAHFDSNCITPGTPFMDRLSKCLHYYIH
DRLNNDPGWKSIKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPDASVVRSDPAFGTQDNFI
FVRLSVLREYLEKELQMPNLPFPYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR
LVNLYKKCVYKTKGWVTDSGDVNLERVQVIMDELGRVEDEIFKRRHNNELVFRARDKARK
KQQQVNFKLLEKTQFAPMSLSAAAKPVQNARQEAANIRIAGMNAVSEQEGSERRGRKRSA
AEAQAEGGEEAEEDEDKHDEVRLWEDGFKERYYESKFEVSRENMEFRYRVALQYVRGLCW
VLRYYYQGCASWKWYFPYHYAPFASDFVNVCGLSTKFERGTQPFRPLEQLMGVFPAASSS
HVPQPWAKLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALEPYYKE
LSQAEIQRNIRGHDRLYVSPAHPSYGALVALYAEGGARPQAPDDTRHPYRSQGVRGDVLL
SGDNVSVGGQLPSPVVGLSPVLGNRVVCVRFEDPQYPEEFIFPARRLQGATEPPRVLKPG
DLTDQQNRNWRPHIGMVRSHTVANLEMAGHRMLGHHLPRERNYGSVPPPQHNQGYGQHQR
SHSFGPQRSGYTSNYNQGQNRGYQGQGYRQNYQGNNHHGNNYHSNQGYSNNQGYTSNQGY
SSNQGYSSNQGYTTQGYNSSQSNGRGYHGQGQKYSRGPQSERRPTGQGGRQGGSWR
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgggagtaccagcgttttttcgctggctcagtcggaaatactcaagcgttattgtggaa
tgcgttgaagaaaggccaactgatgttgatggtcaattgatacatatagattcatctttg
ccaaacccaaatggagtggagtttgataacttgtatttggatatgaacggtataatacac
ccatgtacgcatccggaagacaagccagcgcctaaagatgaggatgagatgatggtggct
atttttgaatgcattgatcgtttatttcgtatcgtgaggcccaggaaactactgtacatg
gcaattgatggagtggccccacgagctaagatgaaccagcaaagatcaagaagatttagg
gcatctaaggagattcaggagaagatagaggaagtagcccgtgtacggtcagagttactg
gctaaaggagcatatttgcctccagagaagcccaaagaggctcactttgactcaaattgt
atcactcctggtacaccattcatggatagactgagcaaatgcttgcattattatatacat
gacagattaaacaatgaccctggatggaagagtatcaaagtgatcctgtcagatgctaat
gttccaggagagggagagcataagatcatggactacataagacgtcaaagagctcagccg
gaccatgaccctaatacacaacatgtgttatgcggtgctgatgctgacctgataatgttg
ggtctggcaacacatgagccaaacttcaccattatacgagaagaattcaagccaaataaa
cctcgcccttgtgatgtctgtgggcagctcggtcatgagatgaaggagtgcacagggaca
actccggatgcttcagtggtacgctcagacccagcattcggtactcaggataacttcata
tttgtcaggttgagtgtgctgcgggagtatttagagaaggaactccaaatgccaaacctg
ccgttcccatatgattttgagagagcattagacgattgggtgttcatgtgctttttcgtt
ggcaatgacttcttaccccatttacccagtctggagatacgagagggtgcggtggataga
ttggtcaatttgtacaagaaatgtgtttacaagactaagggctgggtgacggactccggt
gacgtgaacctggagcgtgtgcaagtgataatggatgagctgggccgcgtcgaggatgag
atcttcaagcggcgtcataacaacgagctggtgttccgcgcgagggacaaggcgcgcaag
aagcagcagcaggtcaacttcaagttgctggagaagacgcagttcgcgccaatgtctctg
agtgctgcagcgaagccagtgcagaatgctagacaggaggctgctaacatccgtattgct
ggcatgaacgctgtctctgagcaagaggggtctgagcgtcgcggacgtaagcggtccgcg
gcagaggcgcaggcggagggcggggaggaggcggaggaggacgaggacaagcacgacgag
gtgcggctttgggaggatggtttcaaggagcgctactacgagagcaagtttgaagtctcc
agagaaaatatggagttcaggtaccgcgtggcgctgcagtacgtgcgggggctgtgctgg
gtgctacgctactactaccagggatgcgcgagctggaagtggtacttcccctaccactac
gcacccttcgcgtcagacttcgtcaacgtctgcggactctctactaagtttgagaggggc
acgcaaccgttccgtccgctggagcagctgatgggcgtgttccccgcagccagctcctcg
catgtaccgcagccctgggcaaaactgatgagcgaccctttttcgcctatcatagacttc
tatcctacggacttcaagattgacttgaacggcaagaagtttgcatggcagggagtcgcg
ctgctgccatttgtggatgagaacagactcttcaaggccctagagccttactataaggaa
ctctcacaggctgaaatccagcgcaacatccgcggccacgaccggctgtacgtgtccccc
gcgcaccccagctacggcgcgctggtggcgctgtacgcagagggcggcgcgcggcctcaa
gcgcccgacgatacgcgccacccctaccgcagccagggggtgcgaggggacgtcctactc
agcggggacaacgtcagcgtcggcggccagctgccgtcccccgtggtgggtctgtctcct
gtgctgggcaaccgcgtggtctgcgtgaggttcgaggacccgcagtaccctgaggagttc
atcttccccgcgcgccggctgcagggcgccaccgagccccccagggtcctcaagccggga
gacctcactgatcagcagaacaggaactggagacctcacattggtatggttaggtcacac
acagtggctaacctagagatggcaggacatcgtatgctgggacaccatttgccaagggaa
cgtaattatggctccgtgcctcccccacagcacaaccagggttatggacaacatcaacga
tctcattcctttggaccgcaacgcagcgggtacacgtcaaattataaccaaggacagaac
cgtggataccagggacagggttacagacagaactaccagggtaacaatcaccatggtaat
aattaccatagcaatcagggttactctaacaaccagggttacactagcaaccagggttac
tccagcaaccagggttattctagcaaccaaggttacaccactcagggttacaatagttcc
cagtcgaatggcaggggttaccacggacaggggcagaagtattccagagggccgcagtcg
gaacgtcgtcctacaggacaaggtggtcggcaaggcgggtcatggcgttga

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