Papilio polytes (common Mormon): 106103898
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Entry
106103898 CDS
T07437
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106103898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppot03041
]
106103898
Enzymes [BR:
ppot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106103898
Spliceosome [BR:
ppot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106103898
Complex C
U5 SnRNP specific factors
106103898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
HTH_61
AAA_22
Cucumo_coat
Motif
Other DBs
NCBI-GeneID:
106103898
NCBI-ProteinID:
XP_013139263
LinkDB
All DBs
Position
Unknown
AA seq
2150 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERRGRDEATGEVLSLSGKLGGTKMGDRAQRTK
PDKAEERKAKRQKRDEATYELSKSKTARAAWADDTPGVLYRPRTQHTRHAYELLLSFMQS
TLGDQPRGLLCGACDEVLMVLKNDKLKDPERKKEIEVLIGALPDERFALLVNLGKKITDF
NVTSSEGNTEIDETYGINVQFEESSEEDDEDAYGEVRDEDKEEGEGSDNEQGKESSAEDD
SDGEGKKNSIHANLSEEQTQKRRDATLHPMDIDAYWLQRRLSRHFPDAMLSQAKSSEVMK
ALAEAADDRDLENRLVLLLGYDCFDFVKVLNKYRYTILYCTKLASSQSENERQSIREEMS
RQPHLMKILAQLETGKGDEETAQQSEAPRKRQKAETETVEGGGQVLGSRKVLALDELVFA
AGSHFMANKRCQLPPGSFRKQRKGYEEVHVPALKPKPFDEDETLVAVEKLPKYVQPAFEG
FKTLNRIQSRISKAALESDENLLVCAPTGAGKTNVALLCALREVGKHVNDDGTVSVQDFK
IIYVAPMRSLVQEMVGNFSKRLAAYNMKVSELTGDHQLTREQIDATQLIVCTPEKWDIIT
RKGGERSFTNLVRLIIIDEVHLLHDERGPVLEALVARTLRTVEHTQEEVRLVGLSATLPN
YTDVAAFLRVRPEKGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKTMEHAG
RNQILVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASVEVLRTEAEQVKNPELREL
LPYGFAIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIVKGTQVYSPD
KGRWSELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVSKL
PDMLNAEIVLGSVQSVRDAVTWLGYTYLYVRMLRAPSLYGISSDKMQEDTLLELHRADLI
HTAASLLDKAGLVKYERKSGHFQPTELGRIASHYYCTYETMQSYNQLLKPTLGEIELFRV
FSLSAEFKHIAVRDEEKLELHKLMERVPIPIKESIEEPSAKINVLLQAYISQLKLEGFAL
MADMVYVTQSACRLLRAIFEIVLHRGWAQLVDKTLALCKMVDRRMWQSMSPLRQFRKMPE
EVIKKLEKKNFPWEKLYELGPNEIGELVRAPKLGKMIHKYVHQFPRLELATHIQPITRST
LRVELTITPDFQWDEKIHGQSEAFWVLVEDVDSEVVLHHEYFLLKHKYCRDEQHVKLFVP
VFEPLPPQYFLRVVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPVTALRNNNY
EALYNETFPQFNPVQTQVFNAVYNSDDNVFVGAPSGSGKSVIAELALLRLLSTNAGGRAV
YVLPKDALADIVFADWYHKFGTKFNLKVVQLTGETATDHKLLNKGQIIITTAEKWDVLSR
RWKVRKSVQNVSLVIVDALQLLGGEEGPVLEVVCSRMRYISSQIGRPIRIVALSLPLADA
RDVSQWLGCNSNASFNFHPSVRPLPLELHIQGFNISHAASRLAAMTKPIYNAICRFAGTK
PCAVFVPSRRHARLLAADLLALAAAAGRSGRFLRARQDLVKPFLDRVKDKMLKETLAAGV
AYLHEGVEPSDRRLVQQLLESGAAQLCVLAAELAWAFAAHVHTVIVADTHVYNGKLHSYE
QYPITTVLQMLGRACRPLEDDRAVAVLMCAAHHKTFFTKLLNDCLPLESHLDHRLHDHMN
AEIVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVETTLSELE
QSKCIAIEDEMDVRPLNLGMIASYYYINYTTIELFSLSLTSKTKIRGLLEIISSAAEYSD
LCIRHREENIIKTLAAKVPHKPAAGAGAGAGAGVRYNDPHVKAHVLLQAHLSRMQLPAEL
QADTALVLTKAIRLIQACVDVVSSSGWLAPGVAAMELAQMVTQAMWAKDSYLRQLPHFTQ
EMVQRCSEKGVETVFDVMELEDAARGKLLQLSPTEMADVARFCNRYPNVELTYEVKNERR
LRVGKPIVVEVSLEREDEIVGPVIAPFFPQKREEGWWVVIGEPKSNSLLSIKRVSLGRSA
RLRLDFVSGAPGRHTYTLYFMSDSYLGADQEYKFTVDVDDAPQTDSSDSE
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcagctgccagacagttgcaatatgaatataaggcgaattcaaatcttgta
ctccaagctgatgtacgtctgatagaacgccgtggtagagatgaggcgacgggcgaggtg
ctttccttgtcgggtaagcttggtgggaccaagatgggtgatcgagcacaacgcaccaag
ccagataaggctgaggagagaaaggctaaacgtcagaaacgtgacgaagctacatacgaa
ttgtctaaatcgaagacagcccgtgcagcatgggctgatgatacaccgggcgtgttatac
cgtccgaggacacaacacacgcggcatgcgtatgaattactgctatcctttatgcagagc
acacttggagatcagcctagaggactgctgtgtggagcttgtgatgaggtcctaatggta
ctaaagaatgataaactaaaagatccggaaagaaagaaagagatagaagttctaattggt
gcgctaccagatgaaaggttcgcattactagtgaaccttggcaagaagattactgatttt
aatgtaacatcgtccgagggtaacacagaaatagatgagacatatggtattaacgtgcag
tttgaagaatcttcggaagaagatgatgaggatgcatacggagaggtgcgggatgaggat
aaagaggaaggggagggatcggacaatgagcaggggaaagagagtagtgcagaagatgat
agtgatggagaagggaagaagaacagcatacatgctaatctctccgaagaacaaacacag
aagcgacgagatgcgactcttcatccaatggatatagacgcgtactggctgcagcgccgc
ctctcccggcacttccctgatgccatgctgtcgcaggctaagtccagtgaggtgatgaag
gctctcgctgaggcggcagacgaccgagacctggagaacagactagtcttgttactgggt
tatgattgctttgactttgttaaagtactcaataaatatagatatacaatcttgtactgc
acgaagttggcgtcatcacagtctgagaacgagagacagagcatccgcgaggagatgtcc
cggcagccgcatctgatgaagatcctggcgcagctggagacagggaagggggatgaagag
acggctcagcaatcagaagcacctcgtaagcgtcagaaggcggagacggagacggtggag
ggaggtggtcaggtgttaggctcgaggaaggtgctggctctggatgagctggtgttcgca
gcgggatcacactttatggccaacaaacggtgtcagttaccaccagggtcttttagaaaa
cagagaaaaggttacgaagaagtccatgtaccagccttgaaacctaaaccatttgatgaa
gacgagactttggttgctgttgaaaagttacctaaatatgtacaacctgcgtttgaagga
tttaaaacattaaatagaatacagagtcgtatatcaaaagcagcgttagaaagtgacgag
aatctcctagtttgtgctccgaccggcgctggtaagacgaacgtggcgttgctttgtgcg
ttacgagaagttgggaaacatgttaacgatgatgggactgtgagtgtgcaagacttcaag
attatatatgtagcgccgatgcgctcgctcgtacaggaaatggtgggaaacttcagtaaa
cgtctcgcagcttacaatatgaaggtatcagaattgactggagatcatcagttaacgaga
gaacagattgacgcaacacagctgattgtgtgcacaccagagaaatgggatattattaca
aggaagggtggagaaagatcgttcacaaatctagtacgtctgataatcatagatgaggta
catcttctccatgatgagagaggacccgtgttagaagcgctcgtagcaaggactctacgt
actgtggaacacacgcaggaggaggtccgtcttgtcggtctgtcggccacgttgcccaac
tacactgatgtcgctgcattcctgcgcgtgcgacctgaaaagggactgttttattttgat
aattctttcaggccagtagcactggaacagcaatacatcggtgtgacagagaagaaagcg
ctgaaaagatttcaagttatgaatgatattgtatatgagaagacaatggagcatgctggc
aggaatcagatcctagttttcgtgcattcccgtaaagagacggggaaaactgcgcgtgcg
attcgagacatgtgcttagagaaagatacattaggacagtttctaagagaggggtcagcg
agtgtggaagtgctgcgtacggaggcagagcaggtgaagaatccggagttaagggaatta
ttgccgtacggcttcgcgatacatcacgccggtatgagcagggtggacagaaccctcgtt
gaagatttgttcgctgatagacatatacaggtgttagtgtcaacggcgacgttagcgtgg
ggagtgaacctgcccgcgcacacagtgatagtgaagggcacgcaggtgtactcgccggac
aagggccgctggagcgagctgggcgcgctcgatgtgctgcagatgttgggtcgtgctgga
cgacctcagtacgatactaagggagagggtatcctgataacgaaccactcggagctgcag
tactacctgtcgctgctaaaccagcagctgccgatagagtcccagctggtgagcaagttg
ccggacatgctcaatgcggagatcgtcctcggctcagtgcagagcgtgcgggatgctgtc
acatggctaggttacacatatctgtatgtacgtatgttacgagcaccatctctatatgga
atatcatcagacaagatgcaagaggatacattactggagttacatcgagctgatttgata
cacacggccgcatcgcttcttgataaggccggattagtaaaatatgaacgtaaatcggga
cacttccaaccgacggagctcggtcgtattgcgtcgcattattattgtacgtatgaaact
atgcaatcgtacaatcagttgttgaaacctactctaggagagatcgaattgttccgtgtg
ttctcgttgtcggcggaatttaaacatattgcggtacgagatgaggagaaactggaatta
cataagttaatggaaagggtgccgataccaataaaagaaagcatagaagagccatcagcg
aagatcaatgtgttattacaagcgtatatatcacaattgaagttggaaggtttcgccctg
atggcggacatggtgtatgtgacgcagtccgcgtgtaggctgctcagagctatatttgag
attgtactgcatagaggttgggcgcagttagtagacaaaactctggcgctatgcaaaatg
gtcgatcgccgcatgtggcagtcaatgtctccgttacggcaattcaggaagatgccggaa
gaggtgataaagaaattagaaaagaagaacttcccatgggaaaaactatatgaactagga
cctaacgagattggggaattagtgcgtgctcccaaactgggcaaaatgatacacaagtat
gtgcaccagtttcccagactagagctggcgactcacatccagcccatcaccaggtccacc
ctcagggtggagctcaccatcactcctgacttccaatgggatgaaaagatccatggtcaa
tcggaggcattctgggtgctggtggaagatgtggactccgaagtagtactccatcatgaa
tatttcctactcaagcacaaatactgcagagacgagcaacatgtcaaattatttgtgcca
gtatttgaacctctgcctccgcaatatttcctacgagttgtgtctgaccgttggatagga
gcagagacacaattgccagtctccttccgtcacctcatactgccagagaagaatttacct
cccaccgagctgttagacttacagccgctgccggtcacagcgctacgaaataataactac
gaagctttgtacaatgaaacgttcccgcagttcaatcctgtgcaaacccaggtgttcaac
gcggtgtacaattctgatgacaacgtgtttgtaggcgcgccctccgggtcgggcaaatca
gtgatcgctgaacttgccctactgaggttgttgtcgactaacgcgggcgggcgggcggta
tatgtattgcctaaagacgctcttgctgatatagtgttcgcggattggtatcataagttt
ggtactaagtttaacttgaaggttgtacaacttactggagagacggcgactgaccacaag
ctgctgaacaagggtcagattatcatcaccaccgcggagaaatgggacgtactgtctaga
cgatggaaggtccgcaagagcgtgcagaacgtgtcgctggtgatcgtggacgcgctgcag
ctgctgggcggcgaggaggggcccgtgctggaggtggtctgctccaggatgcgctacatc
agctcgcagataggtcgtcctatccgtatagtggcactatctctgccgctggcggacgca
cgcgatgtatcccagtggctcggctgcaactccaacgcctccttcaacttccaccccagc
gtgagaccgctgccgctagagctgcatatacagggtttcaacatatcccacgccgcgtct
cgcctggcagcgatgactaaaccgatatacaacgccatctgtcggttcgcgggcacgaag
ccgtgcgccgtgttcgtgccctcgcgccgacacgcgcgcctgctggcagctgacctgctg
gcgctggccgcagctgctggcaggtcaggcaggttcctgagagcaaggcaggatctggtg
aaacccttccttgatagggttaaggataagatgttaaaggaaactctagcagccggagtg
gcatatttgcacgagggcgtggagccgtccgaccggcggctggtgcagcagctgctggag
tcgggcgcggcgcagctgtgcgtgctggcggccgagctggcgtgggccttcgccgcgcat
gtgcacactgtcatcgtggctgacacgcatgtatacaacggcaaactgcactcctacgag
cagtatccgataacgacggtgctgcagatgttgggtcgcgcgtgccgcccgctggaggac
gatcgcgcggtcgcagtgctgatgtgcgctgctcaccacaagaccttcttcaccaaactg
ctaaatgattgtctaccgttggagagccacttggaccacagactgcacgaccatatgaac
gcggagatcgtcaccaagacaatagagaacaagcaggatgctgtcgactacctcacctgg
accttcctctatagaagattgacacagaatcctaattattacaacttgcaaggagtcaca
catagacatctatcggatcatctatctgagctggtggagacgacactatcagaactggag
cagtcgaaatgtatcgcgattgaggacgagatggacgtgcggccgctcaacctcggcatg
atcgcctcatactactacatcaattatactactattgaactgttcagcctgtcgttaacc
agcaagacgaagatccgaggtcttctggagatcatatcctcggccgcggagtactcagac
ctctgcatccgacaccgagaggagaacatcatcaagacattagcagctaaagtgcctcat
aaacctgccgctggtgctggtgccggtgccggtgcgggtgtgcgctacaacgacccgcac
gtgaaggcgcacgtgctgctgcaggcgcacctctcccgcatgcagctgcccgcggagctg
caagctgatacagctctcgtactcactaaggctatccgtcttatccaggcgtgtgtggat
gtggtctccagcagcggctggctggctccaggtgtggctgcgatggagctggctcagatg
gtgacgcaggcgatgtgggcgaaggattcttaccttcgtcagctgccgcacttcacacag
gagatggtgcagagatgctcagagaagggtgtggagacggtgttcgacgtgatggagctg
gaggacgcggcgcgcggcaagctgctgcagctctcgcccacggagatggcagacgtcgcc
aggttctgcaacaggtatcctaatgtggaactcacttatgaggttaaaaacgaacgccgt
ttacgcgtaggcaagccgatagtggtggaagtgtctctcgagagagaagacgagatcgtt
ggacctgttattgcgccgttcttcccgcagaaacgtgaagaaggctggtgggtggtaatc
ggtgaacctaagagcaacagcctcctctccataaagcgtgtctcgctagggcgctccgcc
cggctgcggctggactttgtgagcggcgctcccggccgccacacgtacaccctctacttc
atgtcagattcatatctgggcgctgatcaggagtacaagtttactgtggacgtggatgat
gcgccgcagactgattctagcgattcagaataa
DBGET
integrated database retrieval system
