KEGG   Papilio polytes (common Mormon): 106107716
Entry
106107716         CDS       T07437                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ppot  Papilio polytes (common Mormon)
Pathway
ppot03030  DNA replication
ppot03410  Base excision repair
ppot03420  Nucleotide excision repair
ppot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106107716
   03410 Base excision repair
    106107716
   03420 Nucleotide excision repair
    106107716
   03430 Mismatch repair
    106107716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppot03032]
    106107716
   03036 Chromosome and associated proteins [BR:ppot03036]
    106107716
   03400 DNA repair and recombination proteins [BR:ppot03400]
    106107716
DNA replication proteins [BR:ppot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106107716
  DNA Replication Termination Factors
   ELG1-RFC complex
    106107716
Chromosome and associated proteins [BR:ppot03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106107716
DNA repair and recombination proteins [BR:ppot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106107716
  Check point factors
   HRAD17(Rad24)-RFC complex
    106107716
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_22 AAA_16 Rep_fac_C AAA_14 RuvB_N Rad17 Viral_helicase1 AAA_18 MeaB AAA_24 AAA_11 AAA_19 Mg_chelatase nSTAND3 RCF1-5-like_lid AAA_5 IstB_IS21 AAA_assoc_2 MipZ NTPase_1 ABC_tran AAA_25 ResIII AAA_28 AAA_30 AAA_3 CbiA RNA_helicase MCM AAA_23 TerL_ATPase bpMoxR SRP54
Other DBs
NCBI-GeneID: 106107716
NCBI-ProteinID: XP_013144155
LinkDB
Position
Unknown
AA seq 318 aa
MNDDDVILMEVDETEPKVEKAVVGPSKPLGLLPWIEKYRPQTFEDIVGNEDTVSRLAVFA
RTGNAPNIIIAGPPGVGKTTTILCLARALLGAAFRDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPAGRHKIVILDEADSMTEGAQQALRRTMELYANTTRFALAANNSERIIEPIQSR
CAVLRYSRLTDAQILAKVIEVCRKEDLSYTEEGVNAVVFTAQGDLRSALNNLQATAQAGR
HVSPDNVFRVCDEPHPMLVRTMLEAWLTRCCTIITVILLFAVIAKLIKQGYAAEDIVSNI
FRVCKTLAVGEELRLGLR
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaatgacgacgatgtgatattaatggaagtagacgaaacagaaccaaaagtcgaaaaa
gcggttgtggggccgagtaaaccacttggattgctaccatggatagaaaagtacaggccg
caaacttttgaagacattgtcggcaacgaggacactgtgtcgcgattggcggtgttcgcg
cgcacgggcaacgcgcctaacatcataatcgcaggtcctccaggtgtcggcaagacgaca
acgatcttatgcctagctcgagctctgctcggtgcagcattccgcgacgctgtgctcgag
ctgaacgcgtccaacgaccgcggcattgacgtcgtacgcaataaaattaaaatgttcgca
caacaaaaggtgacgctgcctgccgggcggcacaagatagtgatcctggacgaggcggac
agcatgacggaaggggcgcagcaggcgctgcggcgcaccatggaactgtacgccaacacg
acgcggtttgcgctcgctgccaacaacagcgagcgcatcatcgagcccatacagtctcgc
tgcgccgtgctgcgctactcgcggctcaccgacgcacagatactcgccaaggtaatagaa
gtgtgcaggaaggaagatttatcatacacagaggagggtgtgaatgcagtagtgttcaca
gcgcagggtgatttgcgttcggcactcaacaacctgcaggcgacagcgcaggccggccgc
cacgttagccccgataacgttttccgtgtgtgtgatgagccgcaccccatgctggtgcgc
accatgctggaggcctggcttacaaggtgctgcactatcatcactgttatattactattt
gcagtgatagcgaagctcataaagcagggatatgctgcagaggacatagtgagcaacata
ttccgcgtgtgcaagacgctggcagtgggggaggagctgcggctggggctaagatga

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