Papilio polytes (common Mormon): 106108198
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Entry
106108198 CDS
T07437
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03013
Nucleocytoplasmic transport
ppot03015
mRNA surveillance pathway
ppot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106108198
09122 Translation
03013 Nucleocytoplasmic transport
106108198
03015 mRNA surveillance pathway
106108198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppot03019
]
106108198
Messenger RNA biogenesis [BR:
ppot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106108198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
106108198
NCBI-ProteinID:
XP_013144750
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MTSVVRRREQDDSGEFSDASQDNDRSNSVNDGVVNESDYDSAASESENSERDPESQETER
RVDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESANTTSDVASEKKEGSEAPAERRRPPR
KSESVNKWSHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGSKKTRAPRPR
SKSQPTSNESSDRSCLRRNASIKNKVKPAVKTVKVKTVKPPVKDKLPALENLTITTVTNN
TYQPFVNVSKKPTPAQPPQNATKPQTQQVVQKPQQTKPQQPKPQQNQQPQPPTNAESKAG
GSKRYSSLRQRPLAETYSPQQTTQPQQQPQQQPPQPQQPPQPQPQQQPQPTPQPTQQPQP
TQQPQPTQQNQQHRYHQEYPGNGPNSQHQGSPVPQMHPQQLLHQPPLNVHRNNVSQPHGP
SPPHQPLQPQHSQQVRLGILEQGPQMVSHPHHSMHNIPPQQHIGQIPPAQGYAPPAMMPA
QYMQQSGSGAVFGGAPLYAQPPAAYPHQMYQHHNYTQAGGVTYYNCAEQEPPPPQPLRAQ
RRPTAAIPIVRPHTHTHTTHTTHTTHTTHTPHTANVSNTAPPDRPVNSTEKDNIDRIVEN
MFVRKPWPAQGSEQPKDKTQENRSSQEPASKESSQPNSLTSSSTSDKPESIQKETEDKTE
KVAEGDVTDSITTDA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtagttagaagacgggaacaggacgattcgggcgaattttcggacgcatct
caggataatgatcgaagcaactcggtaaatgacggggtggtgaacgaatcggattacgat
tcagccgcgagtgaatcggagaactcagaacgagatccagagagtcaggaaaccgagaga
agagttgatgatgatgaggacagaagtaatcctcagtacataccgaagagagggacattc
tacgagcatgacgatcgtaccgctgccagtggcgaagaatcggctaacacgacatcggat
gtcgcttcagagaagaaggaaggctccgaggcgccggcggagcgcaggcgacctccacgg
aaatcggagtccgttaataaatggtcacacgataaatataatgaaaatgaacagatgcca
aaatcccgtgacgagttagttgctatatacggctatgatataaggaatgaagacgcgccg
ccgcacgcacgaaggaacaggcgatatggcagtaaaaagacaagagcccctcgtcctcgt
tctaaatctcagccgacatcaaacgagtcttcagacaggagttgtttgcgacgtaacgcg
tcaataaagaacaaagttaagccagctgtcaaaactgtcaaagtcaagactgtcaaacca
cctgtcaaagataaactaccggccttggagaatctcacaattactacggtcactaataat
acctatcaaccattcgttaatgtttcgaagaaaccaacacccgcacagccgccgcagaat
gcgacgaaaccgcaaacgcaacaagtggtgcagaaaccgcaacaaacaaaaccgcaacaa
ccgaaaccacaacaaaatcaacaaccgcaaccacctactaatgcggaatcaaaagcaggc
ggtagcaagcggtacagcagtttgagacaacgaccactcgctgagacttattcgccgcaa
caaacaacgcaaccgcaacaacaaccacaacaacaaccaccacaaccacaacaaccacca
caacctcaacctcaacaacaaccgcaaccaacaccacagccgacacaacagccgcaacca
acacaacaacctcaaccgacgcaacaaaaccaacaacatagatatcatcaagaatatcca
ggaaatggtccgaactctcagcatcagggcagccctgtgccgcaaatgcatccgcaacaa
ttattgcatcaaccacctttaaatgtgcatcgtaataatgtgagtcagccgcacgggccc
tcgccgccgcaccagcccctgcagccgcagcactcgcaacaggtgagactcggcatatta
gagcaaggtccgcaaatggtctcccatccgcaccactccatgcacaatatacctccgcag
cagcatataggacaaatcccccccgcacaaggctacgcgccccccgccatgatgcccgca
cagtatatgcagcaaagtggtagcggcgcggtgttcggtggtgcgccgctctatgcgcag
cctcccgctgcctacccccatcagatgtaccagcatcataattatacgcaggctggcggt
gtgacgtactacaactgcgcggagcaggagccgccgccgccgcagccgctgcgcgcgcag
cgccgccccaccgccgccatacccatcgtgcggccgcacacacacacacacacaacgcat
acaacacatacaacacatacaacacatacacctcatactgcgaacgtgagcaacaccgcg
ccaccagacagaccggttaattcaacagagaaagataatatagatagaattgtggagaat
atgttcgtaagaaagccctggcctgcgcaaggctctgaacaaccaaaagataaaacacaa
gagaacagaagttcgcaagagcccgccagtaaagaatcgtcacagccgaacagtctcaca
tccagttctacttctgataagccggagagtatacagaaggagacagaagataagacggag
aaggtcgcagaaggtgacgtcacggatagtataacaacggatgcctga
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