KEGG   Papilio polytes (common Mormon): 106108529
Entry
106108529         CDS       T07437                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
ppot  Papilio polytes (common Mormon)
Pathway
ppot03030  DNA replication
ppot03410  Base excision repair
ppot03420  Nucleotide excision repair
ppot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106108529
   03410 Base excision repair
    106108529
   03420 Nucleotide excision repair
    106108529
   03430 Mismatch repair
    106108529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppot03032]
    106108529
   03036 Chromosome and associated proteins [BR:ppot03036]
    106108529
   03400 DNA repair and recombination proteins [BR:ppot03400]
    106108529
DNA replication proteins [BR:ppot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106108529
  DNA Replication Termination Factors
   ELG1-RFC complex
    106108529
Chromosome and associated proteins [BR:ppot03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106108529
DNA repair and recombination proteins [BR:ppot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106108529
  Check point factors
   HRAD17(Rad24)-RFC complex
    106108529
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_lid_RFC1 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_14 AAA_11 RuvB_N DUF815 AAA_16 AAA_30 AAA_5 AAA_7 PhoH DEAD ResIII AAA_19 Mg_chelatase AAA_3 LisH_TPL nSTAND_NTPase5 bpMoxR AAA_24 TP_0021_N Sigma54_activ_2 Gp44_lid Thioredoxin_6
Other DBs
NCBI-GeneID: 106108529
NCBI-ProteinID: XP_013145170
LinkDB
Position
Unknown
AA seq 335 aa
MTVGETGKNLPWVEKYRPSKLEDLVSHDDIIKTIGQFMKENQLPHLLFYGPPGTGKTSTI
LACARQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTDNVRFCIICNYLGKIIPALQSRCTRFRFAPLQHAQIVPRLRDIV
EKENVKISEDGIQALLELSGGDMRKVLNTLQSTWLSARDVTEDTVYTCVGHPLRADVDTV
LTRLLNEDDFGVCFKFIQDLKILKGLALGDILTEIHTKIQRVKFPPEVLMSLVIKMAESE
ARLASGCSERIELAALIAAFHLARQQIDIDAIANS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaccgtgggagaaacaggaaaaaatttaccatgggtagaaaagtacaggccgtcaaag
ttagaagacttggtatcacacgatgatataataaagacaattggtcaatttatgaaagaa
aatcaactgccacatcttttattttatggaccaccgggtacagggaagacatcaacaatt
ttagcttgcgccagacaaatgtataccccacagcaatttaattctatggtacttgaatta
aatgcatctgatgatagaggtataggaattgtaagaggacaaattcttagctttgcttca
acaagaaccatattcaaggcgggtcccaagttaattatattagatgaagctgatgcaatg
acaaatgatgcacaaaatgctctgagaagaataatagagaagtacacggacaacgtgcgt
ttctgtataatctgcaactatctcggcaagataataccggcgctgcagtcgcggtgcact
cgcttcaggttcgcgccgctgcagcacgcacagatcgtaccgaggctacgggatatcgtt
gaaaaggagaatgtaaaaatatcagaggatggtatccaggcgctactggagttgtctggg
ggcgacatgcgcaaggtgctgaacacgctgcagagcacgtggctgtcggcgcgtgacgtc
accgaggacaccgtctacacgtgcgtgggacacccgctgcgcgcggacgtcgacaccgtg
ctcacacggctcttgaacgaggacgacttcggggtatgctttaaattcattcaagatttg
aaaatattaaaagggttagcacttggcgatatcttaacagagatacatacaaaaattcaa
agggtgaaattcccgccggaggtgctgatgtcgctagtgatcaagatggcggagagcgaa
gcgcggctggcgagcggctgtagcgagcgcatcgagctggccgcgctcatcgccgccttc
catctcgccaggcaacagatagatatcgatgccatagcaaactcttga

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