Papilio polytes (common Mormon): 106109375
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Entry
106109375 CDS
T07437
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ppot
Papilio polytes (common Mormon)
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppot03016
]
106109375
Enzymes [BR:
ppot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
106109375
Transfer RNA biogenesis [BR:
ppot03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106109375
Prokaryotic type
tRNA splicing ligases
106109375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF6471
Motif
Other DBs
NCBI-GeneID:
106109375
NCBI-ProteinID:
XP_013146303
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRSYNEELKYLEKMNPHCWRIKKGFQPNMNVEGLFYVNSTLEKLMLEELRNSCRPGMT
GGFLPGVKQIANVASLPGIVGHSIGLPDVHSGYGFAIGNMAAFDMSDPKSIVSPGGVGFD
INCGVRLLRTNLSEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIFD
KYAASKMGLERTGQVVVMIHSGSRGFGHQVATDALVEMEKAMKRDKIDVNDRQLACARIN
SVEGQNYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFKMAPDDLDMHVIYDVSHNIAKIE
EHVVDGKVKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGSMGTCSYVLTGTQQGM
TETFGTTCHGAGRALSRAKSRRNIDYKDVLNKLESMGISIRVASPKLVMEEAPESYKNVT
DVVDTCHAAGISKKTVKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtggtaaggagttataatgaagaacttaaatacttagagaagatgaacccccattgc
tggagaatcaagaaaggatttcagccaaacatgaatgtggagggtttattttatgtcaat
agtacacttgaaaaattaatgttggaagagttaaggaactcatgcagacctggaatgacg
ggagggtttttacccggcgtgaaacaaattgctaatgtcgcttctttaccgggaattgtg
ggtcactctattgggctgccagatgttcattcgggatacggttttgctataggaaatatg
gcggcatttgatatgtctgaccctaaatcaattgtttcgcctggtggtgttggttttgat
attaattgtggtgttcgtttacttagaaccaatttaagtgaaaaagatgtactcccaatt
aaggaacaactggcacaaagtctttttgatcacatacctgttggtgttggatcaaaaggt
ataattcctatgaatgcaagagacttggaggaagcattagaaatgggtatggattggtct
cttagagaaggatatgtttgggctgaagataaggaacattgtgaggagtatggtcggatg
ttgaatgcagatccatcaaaagtaagtcttagagcaaagaagagaggtctaccacagttg
gggacactgggtgctggtaaccattatgctgagatacaagtggttgatgaaatatttgat
aaatatgctgcaagcaaaatgggcttggagagaactggccaagttgtagtgatgatacat
tctggaagtagagggtttggacatcaagttgcaacagatgctctagttgaaatggaaaag
gcaatgaagagggacaagattgatgtaaatgataggcaattagcttgcgccagaataaat
tctgttgaaggacaaaattatctgaaggcaatggcagcggctgctaactttgcttgggtt
aacagaagctcgatgaccttcctaactcgacaggcatttgcaaaacaattcaaaatggct
ccggatgatttagacatgcatgtgatatatgatgtgtcccacaatattgctaaaattgag
gaacatgttgtagacggaaaagtgaagacattattagttcacagaaagggttctacaaga
gcattccctccgcaccatcccttaattccggtagattaccagctgactggtcagccagtg
ttgattggtgggtcaatgggcacatgcagctatgtcctcactggaactcaacagggcatg
actgaaacttttggtactacttgtcatggagcgggccgtgcattgtctcgtgctaaatct
agaaggaacattgattataaagatgttttgaataaattagagagcatgggtatatctatt
cgtgtagcctcacctaagcttgtgatggaagaagctccggagtcatataagaatgtgact
gatgttgttgacacctgccatgccgctggtatcagcaagaagactgtcaagttaaggcct
attgctgttataaaaggctga
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