Papilio polytes (common Mormon): 106110369
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Entry
106110369 CDS
T07437
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-3 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03022
Basal transcription factors
ppot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106110369
09124 Replication and repair
03420 Nucleotide excision repair
106110369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppot03021
]
106110369
03400 DNA repair and recombination proteins [BR:
ppot03400
]
106110369
Transcription machinery [BR:
ppot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106110369
DNA repair and recombination proteins [BR:
ppot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106110369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF4726
Motif
Other DBs
NCBI-GeneID:
106110369
NCBI-ProteinID:
XP_013147641
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MTTSSEDVLLSVGYVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNPAGADAQAKDRDQVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVISSEEYWNTPTLKHYTDSSNVKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDQAIASAMKNTTLDLTVDLPQFIEPVPLLPAEDEAPHDKDRGDSTSIHR
NMIKRFNQHSIMVLKASHKTNSSNSNSSNSKTTNNNNKVVENGVKETNGVTEKRPAEEKC
STEPIEKKKRILEKIHYEDLEDSNTNGETQELKLSKVERYLLGPSSQMSQTVNTTNPPPL
SALASVCQAWSGGQQCLRPVRVGAGAAVGALGELSPGGALMRHQHAASMAQLIPAEVKSE
LHRLYLSCGEVLRELWRSFPQPAGGGGGAGEADDAARAHAFYEALLRFRNVKLRPFEEKM
LRDLTPLATTLTKHLNQMIDTACAKYAVWQQRQAKLR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcttcggaggacgtattattgagtgttggatacgtgagatataagaaggga
gatgggaccctttacgtgatgaatcagagattagcttggatgctggagaaccgagataca
gttgctgtatctcataaatatgctgatataaaaactcaaaaaatctcacctgcgggaaag
ccgaaagtccaactccaagttgtgttacatgatggcacatgttcaactttccattttgtt
aatccggccggagcggacgcacaggccaaagatcgggaccaggttaaaatgttactacaa
aacctactgcccaaatttaaaagacaaattgatggagaactagagatgaaatcaagactt
ttgtcgctccatccgactttaaagcatttatatgaagatttagttatatctaaagtaata
agcagcgaggaatactggaatacacccacattgaaacattatacagattcaagtaatgtt
aaacaagaggctggtgtgtcgggagcatttctcgctgatatacaacctcagacagatggt
tgtaatggactgaaatataacctaactcaagatataatagacgctatattcaaaacatat
ccagcggttaggaagaaacacatagattatgttcctaataagatgactgaagctgaattt
tggaccaaattctttcaatcacattattttcatagggataggatagcatcatcttcaagt
aaagacttgtttggggagtgcgccaagttggatgaccaagccattgcttccgctatgaag
aatactacattagatctcacagtggatttaccgcagttcatagagccggtgccgctgctg
cccgcggaggacgaggcgccgcacgacaaggaccgcggcgacagcacctccatacaccgc
aatatgatcaaacgattcaaccaacactccatcatggtgctcaaagctagtcataaaaca
aactctagtaatagtaatagcagtaatagtaaaacaacaaataataataacaaagtagta
gaaaacggtgtgaaagagacaaacggagtaacggaaaaaaggccagcggaggagaaatgt
agtacagaaccaatagagaagaagaagagaatattagagaaaatacattacgaagatcta
gaagattcgaatacgaatggagagacgcaagaattaaagttatcaaaggtagaaagatat
ttattaggaccgtcgtcccagatgagtcagacagtgaacacgaccaacccgccgccactt
tccgccctcgcttcagtctgtcaggcgtggagcggcgggcagcagtgcctgcggccggtg
cgcgtgggcgcgggcgcggcggtgggcgcgctgggcgagctcagcccgggcggcgcgctc
atgcgccaccagcacgccgcctccatggcacagctgatccccgcggaggtgaagagtgag
ctgcaccggctgtacctgtcgtgcggggaggtgctgcgggagctgtggcgcagcttcccg
cagccggcggggggcgggggcggtgcgggggaggcggacgacgccgcgcgcgcacacgcg
ttctatgaagccttgttgaggttcaggaatgttaaactaaggcctttcgaggaaaagatg
ttaagagatctaacacctttagcgacgacgttgaccaaacatttgaaccaaatgatagac
acggcgtgcgccaagtacgccgtctggcaacagcggcaagccaagctgcggtag
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