Papilio polytes (common Mormon): 106110856
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Entry
106110856 CDS
T07437
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106110856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppot03019
]
106110856
03012 Translation factors [BR:
ppot03012
]
106110856
Enzymes [BR:
ppot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106110856
Messenger RNA biogenesis [BR:
ppot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106110856
Translation factors [BR:
ppot03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106110856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
nSTAND3
AAA_19
FtsK_SpoIIIE
T2SSE
AAA_22
RsgA_GTPase
ABC_tran
AAA_11
AAA_29
Motif
Other DBs
NCBI-GeneID:
106110856
NCBI-ProteinID:
XP_013148254
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MSRNNWNKHDQSWKIDKSQRPPGLKGREIGLYYKNLKKGKKEAKKKSKNILSLTIPQPVV
TSVKSNLRQILFIAKEQDIKLPNIVTTPFSHIATKEIKTEVPDDTGEEKNDEFKLPDPVK
IKTEQDLDAFSNKPSTSSLPDFIPIYSEDDMEFECNDKQLSLRTSKSYKYAYEDIITGTF
DDKLTESLSKGITINFNNEHTSNLNVSFQEEYKEMITKEKYKTFMKFRETLPTYKKSKEI
LDLINNNQVIVISGETGSGKSTQIPQLILDEAITNGKGANVKIMVTQPRRIAASSLANRV
AQERCDVLGNSVGYSVRLERVEERPRGSIQYCTTGVLLVELEVHQGLTNWSHIVLDEVHE
RDCHVDISMCMLKQVLKRRQDLKLILMSATLDADTLSQYFDNCPMMKIEGIAYPVEDVYL
EDILDMTKYKLPEKPNKHRNQPKYKRYLKSHKQSDEMEKDIKYKAEIMNWLESKKSVLDY
DVYKTLQDSRIEELDLNLVLELLKYICRKGPGAVLIFLTGIGDISKFLRLMNESNQFPKE
RYEIYPLHSKLPSLDQHKIFERPPDSVRKIIVATNIAETSITIDDIVYVIDGGRIKLNGF
DVEDKISTLQFEWVSQANLRQRRGRAGRCQPGVCYHMMTSYRAGSLPERLLPELQRTDLL
EAVLSAKRLRLGRAADAFALMPSPPAHATVQWAVNHLQQCGALDAQERLTPLGWHVARLP
LHPAAGKLLLLAALFGCLDRAASLAAVWSFKDPFQLVIGKEAEVDEVKRSFTLGEPSDHV
AISEAVLQWERCRSRQHKHSFAYSNFLSNNTLELLADMKKQLGNNLKQMGFLASGDVKSR
YENRNANNMSLFKTIVAAALYPNIATVRWTNINSRIRPARIKVYTPEEGNIALHPSSVMA
SSKNPRSSNRPLCNKPGANWLVYWLKQRSTSRFLLEVTLIYTLPLLFFGEFVVSDVEEKK
PDECCFSIKSVIVKVKNESADILHKLRSLLDLVLARKVTTDQSSYHSRFEEEVINAVIDL
ITAEDEGVEYMDADNSESDSEDSFRSRRY
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaaacaattggaataaacatgatcaaagctggaagattgacaaaagccaaaga
cctcctggtctaaagggaagagaaatcggactttattataaaaaccttaagaaagggaaa
aaggaagctaagaagaaaagtaaaaatattctgtccctgacaatacctcagcctgtggtt
acatcagttaagagcaacttaaggcagatattatttatagcgaaagagcaagatattaag
ctaccaaatattgttacaactccattctctcatattgctacaaaggagataaaaacagaa
gtaccagatgatacaggagaagagaaaaatgatgaatttaagctaccagatccagttaaa
attaaaactgaacaagatttagatgcatttagcaacaagccgagtacatcatctctacct
gattttataccgatctacagtgaagatgatatggaatttgagtgtaatgacaaacaacta
tcactaagaacttcaaaatcttataaatatgcatatgaagatattataacaggaacattt
gatgataagcttacagagagtttatcaaagggtataacaataaatttcaataatgaacat
accagtaatcttaatgtgtcctttcaagaagaatataaagaaatgatcaccaaagaaaaa
tacaaaactttcatgaaatttcgtgaaacattaccaacatataagaaatctaaggaaata
ctagatcttattaacaataaccaagttattgtcataagtggtgaaactggcagcggaaaa
tcaacacagataccgcaacttattttagatgaagctataacaaatggcaaaggtgctaat
gttaagataatggtaacacagccgaggagaatcgctgcttcatctctcgcaaatagagtt
gctcaggaaaggtgtgatgtactaggaaattctgtagggtactcggtaagattggagaga
gtagaagagagacctcgtggcagtatccagtactgtaccacaggtgtgctgctggtggaa
ctagaagtacatcagggtctgaccaattggagccatattgttctagatgaagtccatgaa
agggactgtcatgtggatatatctatgtgcatgttgaaacaggttttaaaaagacgccaa
gatttgaaactgattctaatgagtgctactttagatgctgacactttatctcaatatttt
gacaactgtccaatgatgaaaatagaggggatagcttaccctgttgaagatgtgtatttg
gaagatattttagacatgacaaagtataaacttccagaaaaaccgaataaacacaggaac
caaccaaagtataagcgatatttaaaatcacataaacaatcagatgaaatggaaaaggat
ataaaatataaagcggaaattatgaattggttagaatcaaagaagagtgtgctcgattac
gatgtttacaaaacactacaggactcgaggatagaagaattagatttgaatctagtgttg
gaacttctcaagtatatctgcaggaagggtcccggagctgtgctaatattcctaactgga
attggagatatatctaaattcctaagattgatgaatgaaagtaatcaattcccaaaggaa
cgttatgaaatataccctctacattcaaaactaccttcactggatcaacataagatattt
gagcgaccaccagatagtgttcggaaaataattgtggcaacaaacatagctgaaacatca
ataactatagatgatattgtatatgtgattgatggtggaagaattaaactgaatggtttt
gatgttgaagataaaatatcgacgctccagtttgaatgggtttcgcaagctaatttgcga
caaagacgaggtcgcgcgggccgctgccagccgggcgtgtgctaccacatgatgacgtcg
taccgcgcgggctcgctgccggagcggctgctgccggagctgcagcgcaccgacctgctg
gaggcggtgctgtcggccaagcggctgcggctgggccgcgcggccgacgccttcgccctc
atgccctcgccgcccgcacacgccactgtacagtgggctgtcaaccatttgcaacaatgc
ggcgcgctggacgcgcaggagcgcctgacgccgctgggctggcacgtggcgcggctgccg
ctgcaccccgccgccggcaagctgctgctgctcgccgcgctcttcggctgcctcgaccgc
gctgccagcctcgccgcggtctggagcttcaaggatccattccagctagtcattggcaaa
gaagcggaagtggatgaggtaaaacgtagcttcacgttgggtgagccgagcgaccatgtt
gcgatatcagaggctgtattacaatgggaacgctgccggtcgcggcaacataaacattct
ttcgcatactccaatttcttatcgaacaatacactggaattgttagctgatatgaagaag
cagttgggcaataatctgaagcagatgggattccttgcttctggtgatgtaaaatctcga
tatgagaacagaaacgctaataatatgagcttgtttaaaactatcgttgctgcagcgctt
tatcctaatatagctacagttagatggaccaatattaattcacgtattcgacccgcacga
attaaagtatatactcctgaagaaggtaacatagctctgcatcccagtagtgttatggcg
tcgtcgaaaaacccaaggtccagcaatagaccgctgtgcaacaagccaggagctaactgg
cttgtctactggcttaaacagcgctccacctcacgctttcttctagaagttacattaata
tatactctacctcttctattcttcggcgagtttgtagtcagcgatgttgaagaaaaaaaa
ccagacgaatgttgtttttcaataaagtcagtcatagtaaaggtgaaaaacgaatccgcc
gatattctgcacaaattgaggtcgttactagacttagtgttagctcgcaaagttacaaca
gaccagtcttcatatcacagtagattcgaagaggaagtaattaatgctgtcatcgatctt
ataacagcagaagatgaaggtgtcgagtatatggatgccgataattcggagtctgactcc
gaagactcgtttagaagtagaagatactaa
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