Paenibacillus polymyxa Sb3-1: RE92_01125
Help
Entry
RE92_01125 CDS
T03812
Name
(GenBank) autotransporter adhesin
Organism
ppoy
Paenibacillus polymyxa Sb3-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Cadherin_5
Big_9
Cadherin_4
CBM96
Big_2
Trypan_PARP
CshA_repeat
DUF3869
HL_N-beta
LntA_helical
TGFb_propeptide
Motif
Other DBs
NCBI-ProteinID:
AJE49742
LinkDB
All DBs
Position
complement(316086..319280)
Genome browser
AA seq
1064 aa
AA seq
DB search
MHFCKSTKRFTYALTAVSLIFSSAISVADAGAAPTAQPELIQDGTWSKSDTWMDAPENYV
GRSSDTVLGYYRSAIQFEMPELTGKVVTKATLRIHISSIGYSYNLNPFLTVYGSTADVWS
NGAFPLNPTDQPLNTKTGSDLQVGWVDFDVTHFVQQQTDDIVSFALLANEEGNPGDYSEI
TYSADDNGVDIPQLILETAALPAVSKMPEVAAVTTEEDIPTSNITITPNPQDSTVVTHYQ
VTNIIGGKLYHSDGVTELFDGTFITAAEASDGVRFVPMANANNAAGDTFSFDVKAAQSAT
GDGLSDATRAVVHVTEVNDAPTAQDQTLSSISEDSGERTIPFAELLAHASAGPNENGQHL
TISSVSSIAGGAVRLDGTNVIFTPQPDFNGTASFSFTVTDDGTSDGVSVPQSVVKQAFFG
VNSVADVPNVTDALTEEDKQSFDGLILTRNQVDGTDVSYFRISNIIGGTLYKNDGVMEIR
DGQFISVADGEAGLKFMPNLYANSPSGDHFSFDVQSSLDMAGTGVSEPNQARITVSEVNN
SPIAVNDTLPSLSANAGAQSIAVDELLANDTAGPVNESLQHLSIASVENTQGGTVVLDGS
VVLFTPNLDYQGPASFDYTVIDNGTTNGALDVKNSTATASFSINSVPTPDPVPTPNPVPT
PDQVPTPDPVPTPDPVPTPDPVPTPDPVQTDDNYTELRASINNRKMLVGDTERATASVVK
SDSSEIDVSEKATWTSSNTNVATVNQGEIRALSEGNTVISATYSGYSFNVPITVTAVTAP
APNNAGSDSSSSSGSGSGHRNSDHSSDDSSSNTATSAVSSSSVTVSKEPVAVPEELVTEP
TVPVQDIFNSNVVVADNKVLQNIKSKAESALNSSTNVKPSDLQGHWAEKTVDTFSKLGIV
NGYKDGSFRPDGEITRAEFSTIISRIFDISGGNQPVVLNDIGDHWAQDAITKLTTAGVLN
GYEDGTFRPDQTIVRQEMAAILARILDLDRLKKDTSNEKSFTDLSTSFAADTIKQLAQAG
VLSGISTSQFGPKYHASRAEALTAIYNALSLNSEIKTVLESLEQ
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttgcaagtctactaaacgattcacatatgcattgacagcagtatcactaatc
ttctcatcggccatctcggtggcagatgctggtgcggcaccaaccgcacaacccgaatta
atccaagacggaacatggagcaagtctgacacttggatggatgctccagaaaactatgtt
ggcaggtcttcggacacagtgttaggatattaccgatcagcgattcagtttgaaatgccc
gagctgactggtaaggttgtaacgaaggcaaccttgcgtattcatatctcttccatcggc
tatagctataacttgaatccttttttgaccgtgtatggatcgactgccgatgtttggagc
aacggagcttttccactgaacccgacggatcagcctttgaatacaaaaacaggctcagac
cttcaagtaggctgggttgattttgatgttacccattttgtacaacaacagacggatgat
attgtctcctttgcattgcttgccaatgaagaagggaaccctggagactattcggaaatt
acatattcagccgatgacaacggcgtagatattccccagttgatattggaaacagcagcc
ctgcccgctgtatccaaaatgcctgaggtagctgctgtaactactgaggaagatatcccg
acatccaatataaccattacaccaaacccgcaagattcaacggtagtgacacattatcaa
gttacgaacattatcgggggcaagctgtatcatagtgatggggtaacggagctttttgat
ggaacttttatcacggcagcagaagccagcgatggcgtgaggtttgtgcctatggcaaac
gccaacaatgcagcgggagataccttctcgttcgatgtaaaggcggctcagagtgcaacg
ggggatggactaagcgatgctactagggctgttgttcatgttacggaagtaaacgatgct
ccgacagctcaagaccaaacgctatcctccatttcagaagactcaggagagcggaccatc
ccttttgcagaactgcttgcgcatgcgtctgctggtccgaatgagaatggtcaacatcta
acgatatcctcagtcagcagcattgcaggaggggctgtacgtttggatggaaccaatgtg
atttttacacctcagccggatttcaatggaaccgctagcttctcttttaccgtcaccgat
gatggaacatcggacggcgtctcagtcccgcagtcggtggtcaagcaagccttctttggg
gtcaattctgtcgctgatgtccctaatgtgacagatgctttgacagaggaagacaagcaa
agctttgacggactgatccttactcgtaatcaagtggatggaactgacgtgtcgtacttt
agaatctcaaacattattggtggaaccctctataaaaacgatggggtaatggaaatccga
gatggtcaattcatttctgtagcggatggcgaagcagggcttaaatttatgccaaatctt
tatgctaactctccatcaggtgatcatttcagcttcgacgtacaatcatcgctagatatg
gctggaacaggggtcagcgagccgaaccaagccagaatcactgtaagtgaggtaaacaac
agtccgatagctgtgaatgatacactgccatcgttatcggcaaatgcaggagcacaatct
atcgctgttgatgaactcttagcgaacgacacggcaggccctgtgaatgagagcttacaa
catcttagcatcgcatcggtagaaaatacgcaaggtgggacggtagttctagacggatcg
gttgtgttattcactccgaatttagactaccagggcccggcaagttttgattatactgtg
attgataacggcacaacgaacggagcattagatgtgaagaactcgacagctaccgcttca
ttctctatcaactcagtaccaacgccagatccagtgccaacaccaaatccagtgccaaca
ccagatcaagtgccaacaccagatccggtgccaacgccagatccagtgccaacgccagat
ccggtaccaacaccagatccggtacaaacagatgacaattacacagaattgcgtgcttct
atcaataatagaaaaatgctagtaggggatacagaacgggctacagcaagcgttgtaaaa
tcagattcgtcagagattgatgtcagtgaaaaagcaacttggacttccagcaatacgaat
gtcgctacggttaatcagggagagattagagcactttcagaagggaacacggtaatttcc
gccacatacagcggatatagctttaacgttccaattaccgtaacagctgttactgctccc
gcacccaataatgctggcagtgattccagtagttccagcggtagcgggtctggccatcga
aacagtgaccattctagcgatgattccagcagcaatacggcaacatcagctgtatcatct
tcatcggtaactgtatctaaagaaccagtagctgtacctgaagaactggtgactgaacca
actgttcctgtgcaagacatattcaacagtaacgtagtggttgcagacaacaaagtactg
cagaatataaaatctaaagcagaatctgctttaaattcttctactaatgttaaaccgtca
gacctacaaggacattgggcagaaaagacggtcgacacgttttcaaagctgggtatcgta
aatggatataaggatggcagtttcagacctgatggtgaaattacccgtgcagagttttct
actatcatctctagaatcttcgatattagtggtggaaaccagcctgtggttttgaacgat
attggggatcactgggcgcaggatgccataacaaaactgaccacagcaggagtattaaac
ggttatgaggacggtacatttagaccagaccaaacgatcgttcgtcaagaaatggctgcc
attttggcgcggatcttggatttagaccgattgaaaaaggacacctcgaatgaaaaaagc
ttcaccgacctgtccacttcttttgcagctgatacgattaaacaattagcacaagctggt
gtgctttcgggtataagtacgagtcagtttggacctaagtatcatgcgtcacgtgctgaa
gccttgactgcgatttataatgcacttagtttgaacagcgaaattaaaaccgtattggaa
agtttggagcagtaa
DBGET
integrated database retrieval system
