Paenibacillus polymyxa Sb3-1: RE92_01235
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Entry
RE92_01235 CDS
T03812
Name
(GenBank) RTX toxin
Organism
ppoy
Paenibacillus polymyxa Sb3-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Big_9
Cadherin_5
Big_2
Peptidase_C25_C
HL_N-beta
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
AJE53975
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Position
complement(341882..346456)
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AA seq
1524 aa
AA seq
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MSSKPNKWLITLALAALVAPTALQTIASAASDASNGVALASLPFKDINNIASEQKTSILQ
AIEAGLLHGDPSGSYRPTDLLTRQEMAALLTQALQLSISKAASSSFSDVDSKNWSSPYIE
AVHRAGLMNGDDGSKFRPKAAVTREEAAVLLMRASGLPITANATESAKLTDWNRVSPWAR
PYVNTALQSGSMKTDQSGFKPKSSVQRQDIAQYMMSTFFPKDHVVQLQKVEDGKAWINGI
EYKLSDSVKGILQTSNQEILKGADIQFVASQRTIESITKLVIHASGQAPIGQASEFSSNL
VLDGHNSSIDGDLTIDGDYISVMNLNVKNSFTVTSSLEHDFYASKFTVQEKTYIQGGDQN
TVLFNTSELQDVEVSKQDVRVVIQGNSRVDQMTLTSNATIENDSSSMIQQLKVLTGAQQV
ELQGTIQQLSVNSDQPVALTGQASINTLVVNNSSPVSLEVAGTVSNLQVNNSGANISVSS
SSQVTNTSFAAGVSSSTVSGVTATSSSSSSSSSRSTVVANTAPKLVTKYEDQAITVGDSE
LRIDLLGHFTDEEQSELKYTAVSSSTKISTVRVEGTNLSIKAVGKGTATITIAADDQAGK
KAGTSFKVRVNESPVSLGIPDQSEQLGSGDVILSLGSFFTDSENDLMTYEVAIDDPSIAT
FTLTGDQLVLTPAVVGHAQVTVKASDGRGGSTNQSFQLVVSAGPNQNPVVIQKPGNQTLT
VGDTDYILDLSPVFLDSNSNPLTISAESSDSSIATVSVNGNQTTVHAVSSGTASIQLKAA
NGLGGEVKTNFDITVNEPPASMGIPGQTKQINSGDIQLSLNDFFTDHEQDSLSYSIDISD
SSVATAVLNGDTLTITPLKIGSTSVSVKASDGHGGSTSRSFQMEVTAVPNQNPVVDQQPG
NQTLILGNSDYTLDLSSVFHDPDGDSVDVSAESSDSLVAAISVNGNIATVHAVSPGTATI
TLKAEDGRGGEVATNFDVSVNESPISTGIPDQMKEINTGDIQLSLNDFFSSPDSYVLTYD
VHSVSDPTVVTAAVYGDILTLTSLTIGSTLVSIKATDGQGGQVIETFKTTVTAGTPQNQN
PVETKPADQSLTVGDAVYSLDLDSVFTDPDGDTLTFKATSSVSSVASAEITGDQLKIQAL
SAGTTSIEIKATDGRGGETSTTFQVNVQSSGSSNPSSNQRPQVEAAIYEQVLTAGVTNAR
SYDLSQLFSDADGDALTFTSTVESSGVANAEVNGSTLTLTPGNQAGSTKVTITADDRHGG
TATYNFQVTNAPLATNGMVQIRTKQGVKDPITYDMSTVFLGETSFKVYSGTADSTFTGPI
PLNGTVWTWNGDISQYYWVIGANGSATVFQVIANPQGPEDLYFSQYLSLDKTRTAIELFY
NPVGDTSKPIENAGYSLEIHQYNLATNTPKVWSQPINSFWKGMPYIYIDSIFYDFFDIVP
VAYYNEEIMLSESDKNVTTGYVLKKNGVTIDVLGDPDGKTQFMPNNGTIIRKSGIKSGSS
FYNLPGEWNSYPNGTLQYFGHHTP
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaagcccaataaatggctgattacattagccttggctgcacttgttgctcca
acggctttgcagacgattgcatctgctgccagtgatgcgtcaaacggagtagctctggcg
agcctgccttttaaagacatcaataatattgcttcagagcaaaagacaagcatcctgcaa
gccattgaagccgggcttctgcatggcgacccgtccggatcctatcggccaacggatttg
ttgacccgtcaagaaatggcggctctgttaactcaagctcttcaactctctatttctaaa
gcagcaagtagcagcttctcggatgtagactcgaaaaattggtccagtccctatattgag
gctgtacatcgtgcaggactcatgaatggagacgacggctccaaattcaggcccaaagcg
gcagtaaccagagaggaggctgcggttctgcttatgcgggcttccgggcttcctattaca
gctaacgccacggagtctgctaaacttactgattggaatcgggtcagcccgtgggcacgg
ccatacgttaatacggctttacagtcgggctccatgaagacggatcagtccggtttcaaa
cctaaatcgtccgttcagcgtcaagatatagcccagtatatgatgtctacctttttcccc
aaggaccatgtagtccaactccaaaaagtagaggatggaaaggcctggattaacgggatt
gaatataaactctcggattcagttaaaggaatcctgcaaacctctaaccaggagattctt
aagggagcagatattcaatttgtagcatcacagcggaccattgaatcaatcaccaaactg
gtcatccatgcgagtgggcaagccccgatagggcaagcttccgaattcagcagcaatctt
gtattagatggtcataactcctcgattgacggcgatttaactattgacggcgactacatt
tcggttatgaatttgaatgtcaaaaatagttttacagttacgtcaagccttgaacatgat
ttctatgcctctaaatttacggtacaagaaaaaacatatattcagggcggtgaccaaaac
accgtattgtttaacacatctgagctgcaggatgtcgaggtatccaaacaggatgtccgc
gtagtcattcaaggaaattcaagggtagatcaaatgacattgacttccaatgcaacgatt
gaaaatgattcatcctcaatgatacagcagttaaaagttcttaccggtgcccagcaggta
gagttgcaggggactattcagcaattgtcggtcaacagtgaccagcccgtagctctgaca
gggcaggcttccattaatacattggttgtgaacaattcctctccggtcagtttggaggta
gctggaaccgtttcaaatttacaagtaaataactctggagcaaatattagtgtaagctcc
tccagccaagtcacgaatacttcatttgcagcaggtgtgtcctcttcgacagtatcagga
gtcactgcaacttcttccagcagctcttctagtagctcgcgttctacggttgtggccaat
acagcaccgaagttagtgaccaaatatgaagatcaagccataacggtgggcgattctgaa
cttcgaattgacttgcttgggcattttacggatgaggagcagtctgagctcaaatatacg
gctgtgtcgtctagtacaaaaatcagtacagtcagagtagagggaaccaacctgtctatc
aaggctgttggcaaagggactgcgactattacgatcgctgcagatgaccaggccgggaaa
aaagcgggcacgagtttcaaggtccgtgtcaatgaatctcctgtttcattgggtatcccc
gatcaaagcgaacagttgggaagcggcgacgtaatcttatcattaggatcgttttttacg
gattctgaaaatgatctcatgacctatgaggtagcgatcgatgatccttccatcgctacc
tttaccctgacgggtgatcaattggtattaactccggcagttgtaggacatgcccaagtt
actgtcaaggcgtccgatggtcggggaggcagcacaaaccagtcgtttcaattagtggta
agtgcgggacctaatcaaaatccggttgtaattcagaagccaggcaaccaaacgctcact
gtgggggatacggactacatcctggatttatccccggtgttccttgattcgaacagtaac
ccactgaccatctcggcagaatcctcggattcttccattgcgacggtttccgttaacgga
aaccaaactacggttcacgcggtttcctcaggaacagcaagcatccagctaaaagcggct
aatggccttggaggcgaggttaagaccaattttgatattaccgttaatgaacctccggca
tccatgggaattccgggtcaaacgaaacaaatcaattcaggtgacattcaattatcttta
aatgacttctttaccgaccatgagcaggattcgttgtcatacagcattgatatttccgat
tcttcggttgcaactgcagtgctcaatggggacacgcttaccattacaccgttaaagatt
ggcagcacatcagtatccgttaaggcatccgatggccatggaggcagcacaagccggtcg
tttcaaatggaagtaaccgctgtacctaaccaaaatccggttgtagatcagcagccgggt
aatcagacactgattttaggtaattcagattataccctggatttatcttcggtattccac
gatcctgatggcgactctgtggacgtttctgcagaatcttcggattcgttagtcgctgct
atatccgttaacggaaacatagccacagtccatgcagtttccccaggaacagcaacgatt
acgcttaaagcagaagatggccgtgggggcgaagttgctactaattttgatgttagcgtc
aatgaatccccgatttccacagggattccggatcagatgaaagaaataaatacaggcgat
attcaattgtccttaaatgatttcttttccagtcctgatagctatgttttaacttacgat
gttcatagcgtttctgacccgactgttgtgacggctgccgtttatggggatatactcact
cttacatcattaacgatcggtagcacattagtatcgatcaaagcaacagatggccaggga
gggcaagtgatcgaaacttttaaaaccaccgtcacggctggaactccgcagaatcagaat
ccagtagaaactaaacctgccgaccagtcgcttactgtaggtgatgcggtttactcactc
gatttagattccgtttttacagatcctgatggagatacgttgacctttaaggcaacctct
tccgtttcgtctgttgcttcggcggaaatcactggagaccaattgaaaattcaggcacta
agtgcagggacgacaagcatagaaatcaaggctacggatggtcgcggaggggaaacttca
actaccttccaggtcaatgtccagtcatccggttcgtctaacccatcttcaaatcaacgc
cctcaagtagaagctgccatttatgaacaagtgttgactgcaggagttaccaatgcaaga
agctacgacctatcccaattgttcagtgatgctgacggggatgccctgacgtttacttct
actgttgaatcaagcggtgtggcaaatgcagaggttaacggatcaacgctgactcttact
ccgggtaatcaggcaggaagtaccaaggtaacgattactgcggatgacaggcatggcgga
acagccacctataattttcaggtaacaaatgctcctctagcgacgaacggaatggttcaa
atccgaaccaagcaaggggtcaaagatccgattacttatgacatgtcaacagtgttccta
ggtgaaacttcatttaaagtctattcgggtacggcagattctacctttactggaccaatc
cctcttaacgggacagtttggacatggaatggggatatttctcaatactactgggtaatc
ggggcgaacggatctgccactgtattccaagtgatagcaaatcctcaagggccagaggat
ctatatttttcccagtatctatccttggataaaacccgcactgctattgaattgttttac
aatccagtaggggatacttctaaacctatagaaaatgcaggatactcacttgagattcat
caatacaatttagctacaaatactcctaaagtgtggagccagcctattaattcgttttgg
aaaggcatgccttatatatatatcgattccatcttttatgactttttcgacattgttcct
gtggcctactataatgaagaaataatgttatcagaatcagataaaaatgtaacgacaggc
tatgtcctgaaaaagaacggtgtaacgatcgatgtcttaggtgatcctgacggcaaaacg
caatttatgccgaataatgggactattatccgaaaatcggggattaagtccggttcctcc
ttttataaccttccaggagagtggaactcttatccaaatggaacgctccaatattttggc
catcatactccataa
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