Paenibacillus polymyxa Sb3-1: RE92_02000
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Entry
RE92_02000 CDS
T03812
Name
(GenBank) dimethylallyladenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoy03016
]
RE92_02000
Enzymes [BR:
ppoy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RE92_02000
Transfer RNA biogenesis [BR:
ppoy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RE92_02000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AJE49903
LinkDB
All DBs
Position
complement(518699..520252)
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AA seq
517 aa
AA seq
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MAKETKDYSKYFDFSDAKIISEDEHSKKIRIRGREINIMAEPNHRKEKQRGKEDVQVLYD
NAVPDELKHIGEGKHYIVYTFGCQMNEHDSETIKGLLEQMGYQATEDRKEADIILLNTCA
IRENAEDKVFGELGHLKHLKTEKPGLLLGVCGCMSQEENVVNRIMQKHGFVDMIFGTHNI
HRLPQLVKEALFSKEMVVEVWSKEGDIIENLPKKREGMRAWVNIMYGCDKFCTYCIVPFT
RGKERSRRPEDVIAEVRDLARQGFKEITLLGQNVNAYGKDLKDMNYRFGDLMDDMRKINI
PRVRFTTSHPRDFDDHLVEVLGKGGNLVEHIHLPVQSGNTDILKKMNRKYTRERVLELAA
KIKAAVPHVSLTTDIIVGFPGETDEQFEDTLSLVREVGYDFAYTFIYSPREGTPAASMED
NVPMSVKKERLRRLNIAVNQNSLRFNSRLRGEVVEVLVEGESKNDSKVLAGRTRSNKLVH
FEGSKDLIGSFVQVKITEPMTFYIKGDLVQTPVAVNG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggaaacaaaagattactccaaatattttgatttctcggatgcgaagattatt
tctgaagatgagcatagcaagaagattcgtattcgtggacgtgaaatcaacattatggcg
gagccaaaccataggaaagaaaagcagcgtggtaaagaggacgtccaggtattgtatgat
aacgcagtcccggacgagctaaagcatatcggtgagggcaagcattatatcgtatataca
ttcggttgccagatgaatgagcatgattctgaaacaatcaaaggcttgctggagcaaatg
ggctaccaggcaaccgaggatcggaaggaagcagatatcattttactgaacacttgcgct
atccgtgaaaatgcagaagataaagtgtttggtgagctgggtcacctcaagcatctcaaa
acagaaaagccgggactgctgctcggtgtgtgtggctgcatgtcgcaggaagagaatgtt
gtgaaccggattatgcaaaaacacggttttgttgatatgatctttggtacccataatatt
catcgtttgcctcagcttgtcaaggaagccctctttagcaaagaaatggtggttgaagtg
tggtccaaggagggcgacattatcgaaaacctgccgaagaagcgtgagggtatgcgggct
tgggtaaacatcatgtatggctgtgataagttttgcacttattgcatcgttcctttcaca
cgtggtaaggaaagaagtcgtcggccagaggatgttattgctgaggtacgggatttggcc
cgtcaaggatttaaagagattaccctgctgggtcagaatgtcaatgcctatggcaaggat
ttaaaagatatgaattacagattcggggatctgatggatgatatgcgcaaaatcaatatt
ccgcgtgtacgttttacgacctcacatccgcgtgattttgacgaccatttggttgaagtg
cttggtaagggcggcaatctggtggagcatattcatctgcctgtacaatccggtaatacg
gatatattgaaaaaaatgaaccgaaaatatactcgtgagcgtgttttggagctggcagcg
aagataaaagcggctgttccgcatgtttctctaacaacagatattatcgtaggtttcccg
ggtgaaacagacgaacagttcgaagatacactatctctggtgcgtgaagtgggctatgac
tttgcctacacatttatttattcaccacgtgaaggcacgccagcggcttcgatggaagat
aatgtgcctatgtcggtcaaaaaagagcgtctccgtcgtctgaacattgctgtgaatcaa
aacagcctacgctttaatagtcgattgcgtggcgaggtggttgaagtgctggtggaaggc
gagagtaaaaatgacagtaaagtgcttgctggtcggactcgttccaataagctggttcat
tttgaaggttctaaggacctgattggttcctttgtccaagtaaaaattacagagcctatg
accttctacattaaaggtgacttggttcaaacgccagtagcggttaacggataa
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