Paenibacillus polymyxa Sb3-1: RE92_02595
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Entry
RE92_02595 CDS
T03812
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RE92_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoy03019
]
RE92_02595
03009 Ribosome biogenesis [BR:
ppoy03009
]
RE92_02595
03036 Chromosome and associated proteins [BR:
ppoy03036
]
RE92_02595
Enzymes [BR:
ppoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RE92_02595
Messenger RNA biogenesis [BR:
ppoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RE92_02595
Ribosome biogenesis [BR:
ppoy03009
]
Eukaryotic type
90S particles
RNase
RE92_02595
Prokaryotic type
rRNA processing factors
RE92_02595
Chromosome and associated proteins [BR:
ppoy03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RE92_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Lzipper-MIP1
DND1_DSRM
Chitin_synth_1N
Phage_P2_GpU
Motif
Other DBs
NCBI-ProteinID:
AJE50017
UniProt:
A0A0F0GB15
LinkDB
All DBs
Position
complement(642588..643286)
Genome browser
AA seq
232 aa
AA seq
DB search
MSGDLKQLQQKLHIQFNNRQLLKQAFTHASYVNEHRFSQHADNERLEFLGDAVLELTVSE
QLYNQYPNRPEGELTKLRAAIVCEPSLVKFAVGLEFGQYVLLGKGEELTGGRTRPALLAD
VFEAFVGALYLDQGLEAVRSFLERYIFPQIVLNGKLQMSDFKTELQELTQHHNMGMLEYK
IVEERGPAHEREFVAEVYMDSERLGAGTGRSKKEAEQQAAAVALNRLKLAES
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgagtggagacttgaagcaattacagcagaaacttcatattcaattcaacaatcggcag
cttctgaagcaggcttttacgcacgcttcctacgtaaacgaacatcggttcagtcagcat
gcagataatgagcgtctggaatttctgggtgacgctgttctggaactgacggtgtctgag
caattgtacaatcagtaccctaaccggcccgaaggcgaactaaccaagttgcgtgcagct
attgtctgtgagccttctttggtgaagtttgctgtcgggcttgagtttgggcagtatgta
ttgcttggaaaaggtgaagagctgacaggcggacgtactcgtcctgctctgttggctgat
gtgttcgaggcgttcgtaggcgcgctttatttggatcagggtctggaagccgtccggtcg
tttctagaacgttatatttttcctcaaattgtattaaacggtaagcttcagatgagtgat
ttcaaaacagagcttcaggaactgacgcagcatcataacatggggatgcttgaatacaag
attgtcgaggaacgcggacctgcccatgaacgcgagtttgtagccgaggtatatatggac
agcgaacggctgggggcaggtacaggacgctccaaaaaggaagctgagcagcaagcggcg
gcagttgctttaaaccgtttgaagctggcggaatcgtaa
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