Paenibacillus polymyxa Sb3-1: RE92_03210
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Entry
RE92_03210 CDS
T03812
Name
(GenBank) RNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoy03009
]
RE92_03210
Enzymes [BR:
ppoy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RE92_03210
Ribosome biogenesis [BR:
ppoy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RE92_03210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ribosomal_S28e
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AJE50132
LinkDB
All DBs
Position
complement(771839..772621)
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AA seq
260 aa
AA seq
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MSGKGRQTQRLDKILTHMGYGSRSDIKKQVKQGMITVNGRTIKDSGLQVHPYQDQIEVNG
ELVVFREFIYIMLHKPPGVISATEDTRERTVLDLLSAEERHFEPFPVGRLDKDTEGLLLL
TNDGKLAHELLSPRRHVPKTYEATVSGHVTEEDILQFTAGVELDDGYVTLPAQLTILRHE
QPHQADGEVTSYISLVIHEGKFHQVKRMFEAIGKKVTYLKRTAMGPLKLDDQLPLGSYRE
LTSEELASIGRDIASATSEV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaaggaagacaaactcagcgtttggacaaaattttaacccatatgggatat
ggttcccgtagtgatatcaagaaacaggtaaagcaaggtatgatcacggtaaacggacgg
accatcaaagatagcggcttacaggttcatccataccaagaccaaattgaagtgaacgga
gaactggttgtatttcgggagtttatttacatcatgctgcacaagcctccaggtgtcata
tccgcaaccgaagatacgagggaacggacggtgctggatttgctgagtgcggaggaacga
cattttgagccttttccagtagggaggctagataaagatacagaaggcttattgctgttg
accaacgacggcaagctggcgcacgaactactgtctccacggcgtcatgtccccaaaacg
tatgaagctacggtgtcggggcatgtcacggaggaggatattcttcaatttacagcagga
gtggaactggacgatgggtatgtcaccctacccgcgcagttgacgattcttcggcatgaa
cagccgcatcaggcagatggagaagtcacttcctatatttcgctcgtaatccatgagggt
aagtttcaccaagtgaagcgcatgttcgaggcgattggtaaaaaggtgacctacttgaaa
agaaccgccatggggccattgaagctggatgatcagcttccactgggcagctatcgagag
ctgactagcgaagaactggcctcgatcggccgtgatatagcatccgcaacttcagaagtt
taa
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