Paenibacillus polymyxa Sb3-1: RE92_04750
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Entry
RE92_04750 CDS
T03812
Name
(GenBank) phenylalanyl-tRNA synthase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RE92_04750
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppoy01007
]
RE92_04750
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoy03016
]
RE92_04750
Enzymes [BR:
ppoy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RE92_04750
Amino acid related enzymes [BR:
ppoy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RE92_04750
Transfer RNA biogenesis [BR:
ppoy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RE92_04750
Prokaryotic type
RE92_04750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AJE50415
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Position
complement(1083370..1085817)
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AA seq
815 aa
AA seq
DB search
MKVSFDWLSEYVSLDQVSAEELAEKITRSGIEIDEVEHRNQGITGVVVGYVKSKEKHPDA
DKLNVCIVDAGQGEDLQIVCGAKNVDAGQKVPVAVVGAKLPGDFHIKKAKLRGVVSMGMI
CSAKELGMNDKLLPKELQEGILVLPEDAEIGTPITKLLALDDQVLDFDLTPNRSDCLSMH
GAAYEVSAILGRDISLADPAKDLVEISDAAADHLSVKVDTPELCTHYAARYITGVKVGPS
PLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADKLENGNIEVRLARTGETLIT
LDDQERKLEPHMLLITDGVKPIALAGVMGGANSEVTDATVSIALESAKFDGGTVRKTSRQ
LGLRSEASLRFEKEVDPGAVIPAVNRAAALIQRYAGGTVHQGIVESASAKAENHIIKLSL
DKINRYLGTELSLLEVKTIFGRLHFGCGDTEPGVLEVEVPTRRGDITIDVDLIEEVARLY
GYDNIPTTPIEGPTTPGALTASQSLRRSLRRLLAHGGWQETISYSFVHPQSTALFNALTE
GSHPVRLAMPMSEDRSVLRTSIIPQMLDTAVYNMNRKQDNLAIFEMGTVFYTEEQTLTRQ
PQEIQVLSLLLTGVRREKQWNIGAEKVDFFDIKGALETVFDYFGLSASIRYVADQPQSYH
PGRSASVWLDVNGSSQRIGTVGQIHPELQQSYGLNDTYVAEIALQQLVEHANSHIQFREL
ARFPSVERDIALVVNKDVEAGELLRVIHAAGGELLQDARVFDVFTGSKLGEDKKSVAISL
TYRHWEHTLTDEEINAAHSPVVTSLEQTFGAELRK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatcattcgattggctgtccgagtatgtatcactggatcaagtgagtgcggag
gagctagcagaaaaaatcacccgttcgggcattgaaattgatgaagtcgaacatcgtaac
caaggaattactggcgtcgttgtaggctatgtcaaaagcaaagaaaagcacccagatgcg
gataagctgaatgtgtgtattgtcgatgcgggtcagggagaagacttgcaaattgtgtgt
ggtgccaagaacgtggatgcaggtcaaaaggttcctgttgcagttgtaggtgccaagctg
ccaggagattttcatattaaaaaggccaagctgcgtggtgttgtgtccatgggcatgatc
tgctcggccaaagaactgggcatgaatgataagctattgccaaaagaattgcaggaaggc
attttggtgctgccagaagatgctgaaattggtacgccaattacgaagctgcttgccctg
gatgaccaggtgctggattttgatttgacacccaaccgttcggattgcctgagcatgcat
ggagccgcttatgaagtgagtgccattctaggacgtgacatttcgctggctgaccccgct
aaggatctggtggaaattagcgatgcagcggcagatcatctgtccgtaaaggtagatact
cctgaactgtgtacgcactatgcagcacgttatatcacaggtgtaaaagtggggccttcc
ccgttatggattcaaaatcgtctgatggcggcaggtgttcgtccgattaacaatatcgta
gatattacgaactacgttatgctggaatacggccagccgttgcatgcttttgatgcggat
aagctggaaaatggaaatattgaggttcggcttgctcgtacaggcgaaactttgattaca
cttgacgatcaggaacgtaagctggaaccgcatatgctgctgattacggacggcgtgaag
ccaattgcattagcaggcgtaatgggcggagccaactctgaggttacggatgcaacggtt
agcattgcgttggaatctgcgaagtttgacgggggaacagttcgcaaaacatcccgtcaa
cttggactgcgttcggaagcaagcctgcgttttgaaaaagaggttgatccaggtgctgtt
atacctgctgtgaatcgtgcagctgcgctgatccagcgttatgcagggggcactgtacac
cagggtattgtagagtctgcttccgcaaaagctgaaaatcatattatcaagctgtcgcta
gataaaataaatcgatatttgggaaccgaactgtcactgcttgaggtgaagacgattttt
ggtagacttcatttcggatgcggcgacacagagccaggggtgctggaagttgaagtacct
acacgccgtggagatattaccattgatgtggacttaatcgaagaagtagcacgtttgtat
ggttacgataatatcccaaccacgccgattgaaggtccaacaactccaggagctttgacg
gcatcgcaatctctgcgtcgctccttgcgtagattgctggctcatggtggctggcaggag
acgatcagttactcttttgtacatccgcaaagcacggctttgtttaacgctctaacagaa
ggcagccatccggtacgtttggctatgcctatgagtgaagatcgtagtgtgttgcgtaca
agtatcattccgcagatgctggatacagcggtgtacaacatgaatcgcaagcaagataac
ctagcgatttttgagatgggaactgtattttacacagaagaacaaaccttaactcgccag
ccgcaggaaattcaagtgctgagtttgctgctgactggggtacgtcgtgaaaaacaatgg
aacatcggtgccgaaaaggttgatttctttgatattaaaggtgcgcttgaaacggtgttt
gactatttcggactaagtgccagcattcgttatgtggctgaccagccgcaaagctaccat
ccaggacgttccgcttcagtatggctggatgtgaacggaagctcccaacggatcggtacg
gttggacagatccatcctgaactgcaacagtcctatggactgaacgatacgtatgtagct
gaaattgcgttgcaacagcttgttgagcatgcaaactcccatattcagttcagagagctg
gctcgcttcccatccgtggaacgtgacattgccctcgtggtgaataaagacgttgaggca
ggtgaactgcttcgtgttattcacgctgcaggcggagaactgttgcaggatgcacgggtg
tttgatgtatttacaggcagcaagcttggtgaagacaagaagagcgtggctatttccctg
acctatcgtcattgggagcatacgttgacggatgaagagatcaatgcggcgcattctcct
gtcgttacgtctctggaacaaacttttggagcggaattgagaaagtag
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