Paenibacillus polymyxa Sb3-1: RE92_05760
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Entry
RE92_05760 CDS
T03812
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RE92_05760 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoy03019
]
RE92_05760 (groEL)
03110 Chaperones and folding catalysts [BR:
ppoy03110
]
RE92_05760 (groEL)
03029 Mitochondrial biogenesis [BR:
ppoy03029
]
RE92_05760 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppoy04147
]
RE92_05760 (groEL)
Enzymes [BR:
ppoy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RE92_05760 (groEL)
Messenger RNA biogenesis [BR:
ppoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RE92_05760 (groEL)
Chaperones and folding catalysts [BR:
ppoy03110
]
Heat shock proteins
HSP60 / Chaperonin
RE92_05760 (groEL)
Mitochondrial biogenesis [BR:
ppoy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RE92_05760 (groEL)
Exosome [BR:
ppoy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RE92_05760 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RE92_05760 (groEL)
Exosomal proteins of breast cancer cells
RE92_05760 (groEL)
Exosomal proteins of colorectal cancer cells
RE92_05760 (groEL)
Exosomal proteins of bladder cancer cells
RE92_05760 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJE50597
LinkDB
All DBs
Position
complement(1294882..1296510)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFSEDARRSMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALITEGLKNVTAGASPIGIRKGID
KAVKAAVAELQAISKPIESKQSIAQVAGISAADDEVGELIAEAMEKVGKDGVITVEESRG
FATELEVVEGMQFDRGYISPYMITDTDKMEAVLDNPYILITDKKITNTQEILPLLEKIVQ
QGKPLVLIAEDIEGEALAMLVVNKLRGTFNAVAVKAPGFGDRRKAMLQDIAALTGGQVIT
EELGLDLKTASVDQLGTARQVRITKENTIVVDGAGNKADIDARVSQIRTQLEETTSEFDK
EKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGVALLNV
YKAVAAVELQGDEQTGVNIVLRALEAPIRTIAANAGEEGSVIVERLKREEVGVGYNAATG
DWVNMIEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKAAMPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagacattaaattcagtgaagacgctcgccgctccatgctgcgcggggtagat
gcattggctaacgctgttaaagtaacactcggaccgaaaggccgtaacgttgtactggag
aaaaaattcggtagcccgctcatcactaatgacggtgtaacgattgcaaaagaaatcgag
ctggaagacgcgttcgaaaacatgggcgctcaactggttaaagaagtagcaaccaaaacg
aacgatgtagctggtgacggtactactacggctactgttttggctcaagccctcatcact
gaaggtttgaaaaacgtaactgctggcgcaagcccaatcggtatccgtaaagggatcgac
aaagcagttaaagcagctgttgctgaactgcaagctatctccaaaccaatcgaaagcaaa
caatccattgctcaagtagctggtatttccgctgctgatgatgaagtaggcgaactgatc
gctgaagctatggaaaaagtgggcaaagacggtgtaattacagttgaagaatcccgcggt
tttgcaacagaactggaagtagttgaaggtatgcagtttgaccgtggctacatttctccg
tacatgattacagatacggacaaaatggaagctgttctggacaatccgtatatcttgatc
actgacaaaaaaatcacaaacacacaagaaatcttgccattgcttgaaaaaatcgtacaa
caaggcaagccactcgttctgatcgctgaagacatcgaaggcgaagcgctggctatgctc
gttgtcaacaaactgcgtggtacattcaacgctgtagctgttaaagctccaggctttggt
gatcgtcgtaaagcaatgctgcaagatatcgctgccctgacaggcggtcaagtaatcaca
gaagaactgggtctggacctgaaaactgcttctgtggaccaactgggtacagcacgtcaa
gtgcgtattacaaaagaaaacacgattgtggttgacggtgctggaaacaaagccgacatc
gacgctcgtgttagccaaatccgtacgcaactggaagaaactacttccgagttcgacaaa
gagaaactgcaagagcgtctggctaaattgtctggcggcgtagcagtaatcaaagtcggt
gcggctactgaaacagaattgaaagaacgcaaactgcgcatcgaagatgccctgaacgca
acccgtgctgcggttgaagaaggtatcgtatccggtggtggtgtagcgctcctgaacgta
tacaaagcagttgcagctgttgaactgcaaggcgacgagcaaacaggcgtaaacattgtg
ttgcgtgctctggaagctccaatccgtaccatcgctgctaacgcaggtgaagaaggctct
gttatcgttgagcgtctgaaacgcgaagaagttggcgtaggctacaacgcagctactggc
gactgggtaaacatgatcgaagctggtatcgtcgaccctgcaaaagtaacgcgttccgca
ctgcaaaacgcagcttccgtagcggctatgttcctgactactgaagcagttatcgctgac
aagccagaaccagaaaaggctgcaatgcctgacatgggcggcatgggcggcatgggcggc
atgatgtaa
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