Paenibacillus polymyxa Sb3-1: RE92_06175
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Entry
RE92_06175 CDS
T03812
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RE92_06175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoy02000
]
RE92_06175
Transporters [BR:
ppoy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RE92_06175
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF7537
Motif
Other DBs
NCBI-ProteinID:
AJE50679
LinkDB
All DBs
Position
complement(1386972..1388627)
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AA seq
551 aa
AA seq
DB search
MSKKYVKHKIWTVLLVLALGTVLVLSGCGGSGEGAKPEAGQPSGGAGEGAQDTLIYGRGG
DSVALDPAIVTESESLKIGMQVFDTLLEYKESTTEIQPGLAESWEVSPDGLVYTFKLRQG
VKFHDGSDFNAEAVVFNFDRWVDPKSPYKFEGDSFDYYDSMFGPDGSRVIKEVKAVDANT
VQFTLNKPQAPFLQNIAMPSFSIASPKAIKEKKADFKSNPVGTGPFVFKEWKRNDTITLE
KNPTYWKEGQPKLAKVIVRSIPDNTARFNALQNGEIDLMEDLNPDDAKQLEGNSELVKIE
RPSFNVAYIGFNLKKKTFNNPKVRQALNHAVNKQAIIDALFAGEAKPAVNPMPPTLWGYD
ESIQDYTYDLNKAKSLLAEAGFPNGLPEPLTFYAMPVSRPYMPDGKKVAEAIQADFEKIG
VKVNIQSPEWATYLDDLKAGEKDDLYMLGWNGDNGDPDNFLYTLLDKDTIPGNNRSFYVN
EELHKILVKAQVEVDQDKRAELYKQAQVIIKQDAPWIPLVHSTPLMAGKANLKGFVPSPA
GIEAYSNIYFE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaagtacgtaaaacacaaaatctggaccgtattgctggtacttgcgctagga
actgttttggtgctttccggttgtgggggatcaggtgaaggagcaaaaccagaagcagga
caaccttcaggtggagcgggagaaggcgcgcaggacacgttgatttatgggcgtggcggg
gattccgtggcgctagatcctgccattgtgactgaaagtgagtcgttaaaaatcggtatg
caggtgtttgatacactactggaatacaaggaaagtaccacggagattcagccggggctc
gcagagagctgggaagtatcaccggacggacttgtctatacgttcaagctgcgtcagggc
gtaaaattccatgacggaagtgactttaacgcagaagcggttgtgtttaactttgaccgc
tgggttgatccgaaaagtccatacaaatttgagggtgactcgtttgactattatgattct
atgttcgggcccgatggaagtagagtgattaaggaggttaaagcggtggatgcgaatacc
gttcagtttacactgaacaagccgcaggctccttttttacaaaatatcgctatgccatcc
tttagtattgcaagtcccaaggctattaaggagaaaaaggctgattttaagagtaatccg
gtcggcacagggccgtttgtatttaaggaatggaaacgaaacgatacgatcacattagaa
aagaatccaacttattggaaagaaggacagccaaagctggctaaggtcatcgttcgttct
atcccagacaacactgcgcgatttaatgctctgcaaaacggggaaattgacctgatggaa
gatttgaatccagatgatgcgaagcagttggaaggtaacagcgagttggtaaaaatcgaa
cgtccctcctttaatgtggcatacattggatttaatttaaagaaaaagacatttaataat
cccaaggtgcggcaggcgctgaatcacgcagtgaacaaacaggccattattgatgcattg
tttgcgggggaggccaagcctgcggtcaatccgatgccacctacgttatggggatacgac
gaaagcattcaggactacacttatgatctgaataaggctaaatctttgctagcggaagcg
ggtttccctaacggacttccagagccgctaaccttctatgcaatgcctgtatctcgtcca
tacatgcctgacggcaaaaaggtagcagaggccattcaagctgattttgaaaaaatagga
gtcaaagtcaacatccaatctccagaatgggctacgtatctggatgatcttaaagctgga
gagaaggatgatctgtacatgttgggatggaatggggacaatggcgacccggataatttc
ctttacacattgctggacaaggatacgatcccaggcaataaccgcagtttttatgtgaat
gaggaacttcacaaaatactggtaaaggcgcaggttgaggttgatcaagataagcgtgcg
gaattgtataaacaagcacaagtcattattaaacaggatgcaccttggattcccttggtt
cacagcacaccgttgatggcaggcaaagccaatcttaagggttttgtaccttctccggca
ggtattgaagcgtatagtaatatttattttgaatag
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