Paenibacillus polymyxa Sb3-1: RE92_06620
Help
Entry
RE92_06620 CDS
T03812
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RE92_06620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoy03400
]
RE92_06620
Enzymes [BR:
ppoy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
RE92_06620
DNA repair and recombination proteins [BR:
ppoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RE92_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJE50765
LinkDB
All DBs
Position
complement(1477412..1477948)
Genome browser
AA seq
178 aa
AA seq
DB search
MTEPETELHEVDDHLDYGLSVVFIGFNPSLKSGEVGHHYANPRNRFWRILEGAGLTPRLY
DPSEDRELLKLGFGFTNIVSRPTRGVEDITREEYAEGRLKLHAKLMEYRPKVACFVGKGV
YTEYSKKSKADWGFQPEPLIPEMHEFVAPSSSGLVRMSLEEITDIYRRLQMFLSSEAV
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccagagacagaactacacgaggtagatgatcatctcgactatggattatcc
gttgtatttatcggctttaatcccagcttgaaatcaggagaggtaggacatcattacgct
aatccgcgcaaccgcttttggcgcatactggagggggccggcttgacgcctcgcttatac
gatccatcggaagatcgggagctgttgaaactgggtttcggttttacaaacattgtttcc
cgtcccaccaggggagtggaggacattacccgtgaggaatacgctgaaggacgtctgaag
ctgcatgcaaagctaatggaataccgcccgaaggtcgcttgctttgtcggcaaaggcgtg
tacaccgaatatagtaaaaaatccaaagcggattggggattccagcctgaaccgctaatc
cccgaaatgcatgaatttgtggcaccttcgtctagtggactggtgcgcatgtcgttggaa
gaaatcacggatatttatcgccgtctccaaatgttcctttcgtcagaagccgtctaa
DBGET
integrated database retrieval system
