Paenibacillus polymyxa Sb3-1: RE92_07335
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Entry
RE92_07335 CDS
T03812
Name
(GenBank) metallophosphatase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoy03016
]
RE92_07335
Enzymes [BR:
ppoy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
RE92_07335
Transfer RNA biogenesis [BR:
ppoy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
RE92_07335
Prokaryotic type
tRNA splicing ligases
RE92_07335
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AJE50894
LinkDB
All DBs
Position
complement(1687552..1688778)
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AA seq
408 aa
AA seq
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MAYQEINGVRVWGAPDSGALSQARTCAENGNVIQALLMADHHKGYSQPIGGVMVYDGQIS
PSGVGYDIGCGNKAVRTKLSAADIMPRISTVMDEIARQISFGVGRVNEIQVDHELFDDPD
WAIYAAIGKQEHDKLKSLAREQLGTVGSGNHFVDVFVEEATGQVWIANHFGSRGFGHKTA
SGFLNLAAGREFLGKAPGEHMDQPPVLLDMNSELGDMYYRAMRLAGRYAYAGRDHVIEQV
LGIMGTEADFTVHNHHNYAWKEQHDGRDTIVVRKGATPSAPGQVGFIGGSMGDISVIVRG
KDSVENRDSYYSTVHGAGRIMSRTQAAGKMNWKTRTRSGGQITDLQMKEAVRNYGVELRG
AGTDESPFVYRKLREVLDAHSETVEVMHVLKPIGVCMAGANEFDPYKD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagaaatcaatggagtacgcgtatggggagcacctgattcgggggcacta
tctcaagcccgcacatgtgccgaaaatggtaatgtgattcaggcgctactgatggcagat
catcataaaggctacagtcagcccattggcggtgtgatggtgtatgacggacaaatttca
ccttcaggtgtagggtatgatatcggctgtggaaataaggcggtaagaaccaagctgtct
gccgcagacattatgccgcgtatttcaaccgtgatggatgagattgcacgtcagatttca
tttggcgtaggtcgtgtgaatgagattcaggtggaccatgaactgtttgatgacccggat
tgggcgatatatgcagcgattgggaagcaagagcatgacaaactgaagtccttggcgaga
gaacagctgggtacagtaggaagtggcaatcattttgttgatgtatttgtggaggaagcg
acaggacaggtctggattgccaatcatttcggcagccggggatttgggcacaaaacagca
agcgggtttctaaatttggccgcaggacgggagtttctcggaaaggcgccgggagaacat
atggatcagccgcctgtactactggatatgaacagtgagctgggggatatgtactatcgt
gcaatgcgccttgccggacgttatgcttatgcaggacgtgaccatgtgatagaacaagtg
cttggtattatggggaccgaagcggactttacggtgcataatcaccataattacgcgtgg
aaagaacagcatgatggacgcgacaccattgtggtccgcaaaggcgcaaccccctcggcc
cctggtcaagtgggctttattggaggaagcatgggggatatctcggtgattgtgcgtggg
aaagattcggtagaaaatcgggattcctactatagtacagtccatggcgcaggtcgtatt
atgagtcgtacccaggcagccggtaaaatgaattggaaaacccgtacgcgtagcggtggt
cagattacggacctacagatgaaggaggctgttcgaaactacggtgtcgagctgcgcgga
gcaggtacagacgaaagcccgttcgtctaccgcaaactgcgtgaggtgctggacgctcat
tccgagactgttgaagttatgcatgtgctgaagccaatcggggtatgcatggctggggcc
aatgagtttgacccatataaggattaa
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