Paenibacillus polymyxa Sb3-1: RE92_08005
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Entry
RE92_08005 CDS
T03812
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00730
Thiamine metabolism
ppoy01100
Metabolic pathways
ppoy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RE92_08005
Enzymes [BR:
ppoy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RE92_08005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AJE51012
LinkDB
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Position
complement(1834548..1836362)
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AA seq
604 aa
AA seq
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MKPTETEGTKETGMKSTAVEKTSAEQASRVNSIPGSRKVYIQGSRPDIAVPEREIALHPT
HTPQGIEYHEPLRVYDTSGPMTDEAYQVDIRQGLPPLRRTWALERGDVEAYEGRTVKPED
NGLKPGSKRETVEFPGVTNRPLRASQGRTVTQMHYARQGIITPEMEFAAIREGVEPEFVR
QELAAGRAILPSNINHPESEPMVIGRHFHVKINANIGNSAVTSSIEEEVEKMTWAVRWGS
DTVMDLSTGRNIHTTREWIIRNSPVPIGTVPLYQALEKVNGEAEKLTWELYRDTLIEQAE
QGVDYFTIHAGVLLRYIPMTANRMTGIVSRGGSIMAAWCLAHHQENFLYTHFEEICEIMK
TYDVAFSLGDGLRPGSIYDANDEAQFAELETLGELTQIAWKHDVQVMIEGPGHVPMHKIK
ENVDLQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTSMLCYVTPKEHLGL
PNKDDVREGVITYKIAAHAADLAKGHPRAQQRDDALSKARFEFRWRDQFNLSLDPERALS
YHDETLPAEGAKEAHFCSMCGPKFCSMRITQDIRAYAADKGLNTEEAVVAGMREKAEQYR
DGER
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgacagaaaccgaaggaacaaaagaaacaggaatgaaatcaacagcagtagag
aagacaagtgcggagcaagccagtagggttaattctatcccggggagccgcaaggtgtat
attcaaggttctcggccggacattgccgtgccagagcgtgaaatcgcgctgcatcccaca
catacgccgcaggggatagagtatcatgagccactgcgtgtgtacgataccagcggtccg
atgacagatgaagcctatcaggtggatattcgtcagggcttgccaccattacggcgaact
tgggcactggaacggggggatgtggaggcttacgagggccgtaccgtcaagccggaggat
aatggactgaaacccggctccaaacgggaaacagtggaatttcccggtgtgaccaaccgt
ccgctacgggcttcacaagggcgcactgtgacgcaaatgcattatgcgcggcaagggatc
attacgcctgaaatggaatttgcggcgatccgtgaaggagtggagcccgagtttgtgcgg
caggagttggcggcaggacgagccattttaccttcaaatatcaatcacccggaaagcgag
cccatggtcattgggcgccattttcacgtgaagatcaatgcaaacattggaaattccgcg
gttacgtcctccatcgaggaggaagtggagaagatgacctgggcggtacgctggggctca
gacaccgtcatggacctgtccacaggtcgtaatatccacacaacgcgtgaatggattatt
aggaattcacccgtaccgattgggacggtgccactatatcaggcactagaaaaggtgaac
ggcgaagcagagaagctgacgtgggagctgtatcgagacacactgattgagcaggcggag
caaggagtggactattttacaattcatgcgggtgtattgctgcgatatataccgatgacg
gcgaatagaatgacgggaattgtatcccggggcgggtcgattatggcagcctggtgcctt
gcgcaccatcaggagaactttttgtatacgcattttgaagaaatctgtgaaattatgaaa
acctacgatgtggccttttctctcggggatggtctgcgtccgggtagtatctatgatgcg
aatgatgaagcacaatttgcagagctggagacgttgggcgagctaacgcaaatcgcatgg
aagcatgatgtccaggtcatgattgaagggccgggacatgtccctatgcacaaaatcaag
gagaatgtggatttacaaatggaaatttgtaaggaggctcccttttatactttagggccg
ctgacgacggatatcgcaccaggatatgatcatattacctcagctatcggggcggccatg
atcggttggttcgggacgtccatgctgtgctatgttacgccgaaggagcacttgggtctg
ccgaacaaggatgatgtccgcgagggagttattacctacaaaattgccgcacatgctgct
gatttggcgaagggtcatccacgggcgcagcagcgggacgatgctttgtccaaggcacgt
tttgaattccgctggcgcgatcagttcaatctttcgcttgaccctgagcgggccttgtcc
taccatgatgaaacgctaccggcagagggggccaaggaagcacacttttgctcgatgtgc
ggtcctaagttttgcagtatgcgtatcacacaggacattcgtgcctatgcggcagataag
ggactgaataccgaggaagccgtcgtcgccgggatgcgtgagaaggcagagcagtatcgg
gatggcgagcgataa
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