Paenibacillus polymyxa Sb3-1: RE92_08670
Help
Entry
RE92_08670 CDS
T03812
Name
(GenBank) Fe3+-citrate ABC transporter substrate-binding protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoy03000
]
RE92_08670
Transcription factors [BR:
ppoy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RE92_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AJE51133
LinkDB
All DBs
Position
complement(1989316..1990983)
Genome browser
AA seq
555 aa
AA seq
DB search
MNLAPLYIRLQHYDRFRVDQIIPENGHNEGMNDNETSLCTLLIALSHGIQLYVDNIAIDL
RQGSCILVLPVQRYTMESSNKEAQLARFNFETFKVEGMTLNPVAHPPLLCGYPYNLLISQ
VNRVLGNEAWTSNQCCSSLSTSEMAMMQGRLQLILGLMAQFDEQVSQLQNNEKINLVQQT
VQYMEQHYDEDLTVEKLANMAGMVRWQYSQKFKIMTGKKPNDYLVQLRINHAKRLLCNST
ETLGKISRQIGFKDEYYFSRCFHKLTGHTPREYENIHLRTGQKTVIDSFGRKIHIPKDTT
RIVTDGKFTLGELLVLAMPPIGAAISIMKDNVIYHNKLRNIHNIGHWADPDKIAQLQPEL
LLLSYVHPEQDLQKLDAIAPTVILNSKFRLFERLRYIAKLVERSKAAEKWITRYENKVRW
VRRQLADAYVAGETATVYLKFGAKLYIMGQSGLAATLYESLGFRPSANVMHLIEQGQAWI
EIQQHQMNHYAGDRNFVLASRQELQTVAHCPHIAALADLSSSKTHFVDSIWNYDDPITRG
QLLEVLPYIFNKKIK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagcacccctgtatattaggctgcaacactatgataggtttcgagttgaccag
ataattccagaaaacggccacaatgagggaatgaatgacaatgaaacgagtttatgcaca
ttattgatagcactcagtcacggcatacagctgtatgtagacaatattgcaatcgatctg
cgacaaggaagctgcattctggttttgcctgtacaacgctacactatggaatcaagtaac
aaagaggcacagcttgcacgctttaattttgaaacctttaaagtagaaggaatgactttg
aatccggttgctcatccacctttgctttgtggttacccctataatctgttgatttcccaa
gtcaatcgagtattaggaaatgaagcatggacaagtaaccaatgttgttcctctctatcc
acatcagaaatggctatgatgcaaggtagacttcagctcattctggggttgatggctcag
ttcgatgagcaagtttcccagttgcagaacaatgaaaagataaacttggttcaacaaacc
gtacagtatatggaacagcattatgatgaggacttaacagttgaaaaacttgctaacatg
gctggaatggtcagatggcaatatagtcaaaagtttaaaataatgaccggcaaaaagcca
aatgattatttggtccaattacgtataaaccacgcaaaaagacttctgtgtaattccacc
gagacattaggcaaaatatctcgacaaattgggtttaaggatgaatactatttcagccgg
tgctttcataaattaactggacacaccccacgtgagtatgagaatattcatcttcgtact
gggcaaaaaacagttatcgattcatttggcagaaagattcatattcccaaagatacaaca
cgtatcgtgactgatggcaaatttacgcttggagaattactcgttttagccatgccccct
ataggagcggccatctctatcatgaaagataacgtgatttatcacaataagttgcgaaat
attcataatatcgggcattgggcagatccagataaaattgcacaactgcagccggagtta
ttattgcttagctatgttcatcccgaacaagatttgcagaaactagatgcgatcgctcct
actgttatattgaacagtaagtttagactatttgagcggttacggtatattgctaaacta
gttgaacgtagtaaagcggcggagaagtggattaccagatatgagaacaaagtaagatgg
gtacgcaggcaattagcagatgcttatgttgctggggagacagctactgtttatctcaag
tttggtgcaaaactttatattatgggccagagcggattggctgccaccttgtatgaatct
cttggctttcgtccttctgccaatgtgatgcacctaatcgagcaagggcaagcatggata
gaaattcagcagcatcaaatgaatcactatgcgggagaccgtaatttcgtcttggcttct
cgccaggaattgcaaaccgttgctcactgtccacatatcgcggctttagccgatctaagt
agcagtaagactcattttgtggatagtatatggaattatgatgatcccattacacgcgga
cagttgctagaggtgctaccgtatatttttaataagaaaattaagtga
DBGET
integrated database retrieval system
