Paenibacillus polymyxa Sb3-1: RE92_08830
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Entry
RE92_08830 CDS
T03812
Name
(GenBank) transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoy03000
]
RE92_08830
Transcription factors [BR:
ppoy03000
]
Prokaryotic type
Helix-turn-helix
Other families
RE92_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_IclR
MarR_2
MarR
Regulator_TrmB
GntR
Penicillinase_R
HTH_Crp_2
DnaD_N
HTH_24
Sigma70_r4_2
HTH_11
Fe_dep_repress
HTH_23
NirdL-like_HTH
Rrf2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AJE54040
LinkDB
All DBs
Position
complement(2015841..2016629)
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AA seq
262 aa
AA seq
DB search
MERLLQHLRNLGFTEMEAKVMVELSRQNAASGYEVAKRLGASRSNVYAALQRLAGQGYLR
ASAGEPVRYSMLPPGELTRMIEGQMRESLLAVEKEMPRTEPAKPTFYNVEGDRKVLESLT
RELERAEHEIVLDLWREEAELLREALKKAESRGVRLLWSCDNGESMLGPWLPRASGTDGQ
ETSGRKFSFVIDRRWCMLGMRGENCPTQALITEHPVMTGLLLDHFAQDLILYELEHDMGS
ELSTRYGWRYESIIGKYMSAGE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtttgctgcaacatctgcggaatctgggttttacggagatggaagccaaggta
atggtcgagctttcgagacaaaatgcggcttccggctatgaagttgctaagcgtttgggg
gcatcgcgctccaacgtgtacgcagctttgcagcgtttggccgggcagggatatctcaga
gcgagtgcgggagagcctgtacgctacagcatgctgccaccgggtgagctgacccggatg
atcgaagggcagatgcgggagtccctgctggcggtggagaaggagatgccacgaacagaa
ccagccaagccgaccttctacaacgtggaaggtgaccggaaggtgctggaaagtctgaca
cgcgagctggaacgggcagagcatgagattgtgctggatttgtggcgcgaggaagccgaa
ctgctgcgggaagcgttgaaaaaagccgagagtcggggtgtgcgtctgctatggtcctgc
gacaacggagaaagtatgttgggaccgtggctaccgcgtgcgtctggtacagacggacag
gaaacgtcagggcgtaagttttcctttgttattgatcggcgttggtgcatgctgggtatg
cggggagagaattgcccgacacaggcgcttattaccgagcatccggtgatgacaggtttg
ctgcttgatcattttgcccaggatcttattctgtatgagctggagcatgatatgggcagc
gagctgtcgacccgatatggctggcggtatgaaagcattatcggcaaatatatgtcagcc
ggagaatag
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integrated database retrieval system
